Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 KRT18P60-201ENST00000312876 1297 ntBASIC19.17■□□□□ 0.66
NICN1Q9BSH3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NICN1Q9BSH3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 AC079630.1-202ENST00000618127 1840 ntBASIC19.16■□□□□ 0.66
NICN1Q9BSH3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NICN1Q9BSH3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NICN1Q9BSH3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
NICN1Q9BSH3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NICN1Q9BSH3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NICN1Q9BSH3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NICN1Q9BSH3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NICN1Q9BSH3 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.14■□□□□ 0.65
NICN1Q9BSH3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.14■□□□□ 0.65
NICN1Q9BSH3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.14■□□□□ 0.65
NICN1Q9BSH3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NICN1Q9BSH3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NICN1Q9BSH3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NICN1Q9BSH3 AC127496.7-201ENST00000625110 1798 ntBASIC19.11■□□□□ 0.65
NICN1Q9BSH3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NICN1Q9BSH3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NICN1Q9BSH3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NICN1Q9BSH3 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.11■□□□□ 0.65
NICN1Q9BSH3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NICN1Q9BSH3 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.11■□□□□ 0.65
NICN1Q9BSH3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.11■□□□□ 0.65
NICN1Q9BSH3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NICN1Q9BSH3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NICN1Q9BSH3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
NICN1Q9BSH3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NICN1Q9BSH3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NICN1Q9BSH3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NICN1Q9BSH3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NICN1Q9BSH3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NICN1Q9BSH3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NICN1Q9BSH3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
NICN1Q9BSH3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.1■□□□□ 0.65
NICN1Q9BSH3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.1■□□□□ 0.65
NICN1Q9BSH3 AC139795.1-202ENST00000500444 432 ntBASIC19.1■□□□□ 0.65
NICN1Q9BSH3 AC022616.5-201ENST00000518796 181 ntBASIC19.1■□□□□ 0.65
NICN1Q9BSH3 DUX4L18-201ENST00000553347 1267 ntBASIC19.1■□□□□ 0.65
NICN1Q9BSH3 AC019171.1-201ENST00000601251 1056 ntBASIC19.1■□□□□ 0.65
NICN1Q9BSH3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms