Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HIST1H2AJQ99878 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.93■■□□□ 1.1
HIST1H2AJQ99878 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIST1H2AJQ99878 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.93■■□□□ 1.1
HIST1H2AJQ99878 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.93■■□□□ 1.1
HIST1H2AJQ99878 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIST1H2AJQ99878 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.92■■□□□ 1.1
HIST1H2AJQ99878 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H2AJQ99878 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H2AJQ99878 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H2AJQ99878 KRT16P3-201ENST00000439127 1283 ntBASIC21.92■■□□□ 1.1
HIST1H2AJQ99878 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
HIST1H2AJQ99878 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HIST1H2AJQ99878 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.92■■□□□ 1.1
HIST1H2AJQ99878 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 MIR6724-1-201ENST00000616420 92 ntBASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 MIR6724-2-201ENST00000616483 92 ntBASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 MIR6724-4-201ENST00000617390 92 ntBASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 MIR6724-3-201ENST00000622482 92 ntBASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.91■■□□□ 1.1
HIST1H2AJQ99878 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
HIST1H2AJQ99878 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HIST1H2AJQ99878 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.89■■□□□ 1.1
HIST1H2AJQ99878 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
HIST1H2AJQ99878 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HIST1H2AJQ99878 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.89■■□□□ 1.09
HIST1H2AJQ99878 GUSBP5-201ENST00000418136 578 ntBASIC21.89■■□□□ 1.09
HIST1H2AJQ99878 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HIST1H2AJQ99878 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIST1H2AJQ99878 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.89■■□□□ 1.09
HIST1H2AJQ99878 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 AC144652.1-201ENST00000609974 1624 ntBASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
HIST1H2AJQ99878 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H2AJQ99878 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 AL353803.4-201ENST00000565882 1934 ntBASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
HIST1H2AJQ99878 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H2AJQ99878 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST1H2AJQ99878 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H2AJQ99878 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H2AJQ99878 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H2AJQ99878 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST1H2AJQ99878 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST1H2AJQ99878 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.84■■□□□ 1.09
HIST1H2AJQ99878 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H2AJQ99878 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms