Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPENQ96T58 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SPENQ96T58 AC092171.4-201ENST00000609130 632 ntBASIC20.45■□□□□ 0.86
SPENQ96T58 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SPENQ96T58 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.44■□□□□ 0.86
SPENQ96T58 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPENQ96T58 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SPENQ96T58 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.44■□□□□ 0.86
SPENQ96T58 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.44■□□□□ 0.86
SPENQ96T58 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPENQ96T58 AC022211.4-201ENST00000625094 2161 ntBASIC20.44■□□□□ 0.86
SPENQ96T58 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.44■□□□□ 0.86
SPENQ96T58 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.43■□□□□ 0.86
SPENQ96T58 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPENQ96T58 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPENQ96T58 AC133637.1-201ENST00000624115 1537 ntBASIC20.43■□□□□ 0.86
SPENQ96T58 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SPENQ96T58 GUSBP6-202ENST00000438529 1198 ntBASIC20.43■□□□□ 0.86
SPENQ96T58 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.43■□□□□ 0.86
SPENQ96T58 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SPENQ96T58 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.43■□□□□ 0.86
SPENQ96T58 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPENQ96T58 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPENQ96T58 DUSP8P4-201ENST00000399538 1761 ntBASIC20.43■□□□□ 0.86
SPENQ96T58 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPENQ96T58 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SPENQ96T58 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPENQ96T58 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.42■□□□□ 0.86
SPENQ96T58 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPENQ96T58 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.42■□□□□ 0.86
SPENQ96T58 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPENQ96T58 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPENQ96T58 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.42■□□□□ 0.86
SPENQ96T58 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SPENQ96T58 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SPENQ96T58 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPENQ96T58 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.41■□□□□ 0.86
SPENQ96T58 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.41■□□□□ 0.86
SPENQ96T58 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPENQ96T58 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.41■□□□□ 0.86
SPENQ96T58 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPENQ96T58 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPENQ96T58 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPENQ96T58 MIR6089-201ENST00000616698 64 ntBASIC20.41■□□□□ 0.86
SPENQ96T58 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.41■□□□□ 0.86
SPENQ96T58 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPENQ96T58 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SPENQ96T58 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SPENQ96T58 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPENQ96T58 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPENQ96T58 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPENQ96T58 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.4■□□□□ 0.86
SPENQ96T58 AC241377.3-202ENST00000626088 1088 ntBASIC20.4■□□□□ 0.86
SPENQ96T58 AC241585.3-202ENST00000628937 1088 ntBASIC20.4■□□□□ 0.86
SPENQ96T58 AC245100.8-202ENST00000629247 1058 ntBASIC20.4■□□□□ 0.86
SPENQ96T58 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.4■□□□□ 0.86
SPENQ96T58 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.4■□□□□ 0.86
SPENQ96T58 AL022069.1-201ENST00000568025 1636 ntBASIC20.4■□□□□ 0.86
SPENQ96T58 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.4■□□□□ 0.86
SPENQ96T58 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.39■□□□□ 0.86
SPENQ96T58 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SPENQ96T58 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SPENQ96T58 AC126544.1-201ENST00000580842 1059 ntBASIC20.39■□□□□ 0.86
SPENQ96T58 AC073111.5-205ENST00000641717 521 ntBASIC20.39■□□□□ 0.86
SPENQ96T58 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.39■□□□□ 0.86
SPENQ96T58 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.39■□□□□ 0.85
SPENQ96T58 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.39■□□□□ 0.85
SPENQ96T58 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SPENQ96T58 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPENQ96T58 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.38■□□□□ 0.85
SPENQ96T58 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.38■□□□□ 0.85
SPENQ96T58 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.38■□□□□ 0.85
SPENQ96T58 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.38■□□□□ 0.85
SPENQ96T58 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPENQ96T58 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPENQ96T58 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPENQ96T58 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.38■□□□□ 0.85
SPENQ96T58 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPENQ96T58 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SPENQ96T58 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SPENQ96T58 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPENQ96T58 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.37■□□□□ 0.85
SPENQ96T58 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.37■□□□□ 0.85
SPENQ96T58 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPENQ96T58 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SPENQ96T58 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SPENQ96T58 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.37■□□□□ 0.85
SPENQ96T58 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.37■□□□□ 0.85
SPENQ96T58 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.37■□□□□ 0.85
SPENQ96T58 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms