Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 AF201337.1-201ENST00000520239 748 ntBASIC7.04□□□□□ -1.28
HMCN1Q96RW7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 AC105036.2-201ENST00000569468 176 ntBASIC7.04□□□□□ -1.28
HMCN1Q96RW7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMCN1Q96RW7 GPALPP1-207ENST00000611650 899 ntBASIC7.04□□□□□ -1.28
HMCN1Q96RW7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC7.03□□□□□ -1.28
HMCN1Q96RW7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 AC091060.1-201ENST00000623524 1766 ntBASIC7.03□□□□□ -1.28
HMCN1Q96RW7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC7.03□□□□□ -1.28
HMCN1Q96RW7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
HMCN1Q96RW7 SNORA78-201ENST00000459373 127 ntBASIC7.02□□□□□ -1.28
HMCN1Q96RW7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 AL139393.2-201ENST00000608721 2025 ntBASIC7.02□□□□□ -1.29
HMCN1Q96RW7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 AC083880.1-201ENST00000608266 535 ntBASIC7.02□□□□□ -1.29
HMCN1Q96RW7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 AC133041.1-202ENST00000642053 222 ntBASIC7.02□□□□□ -1.29
HMCN1Q96RW7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 AC007322.1-201ENST00000426983 750 ntBASIC7.02□□□□□ -1.29
HMCN1Q96RW7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 FOXO3B-201ENST00000395675 1928 ntBASIC7.02□□□□□ -1.29
HMCN1Q96RW7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 ESRRAP1-201ENST00000400596 1257 ntBASIC7.02□□□□□ -1.29
HMCN1Q96RW7 TPM4P1-201ENST00000436100 807 ntBASIC7.02□□□□□ -1.29
HMCN1Q96RW7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC7.02□□□□□ -1.29
HMCN1Q96RW7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 KRT19P1-201ENST00000405746 1186 ntBASIC7.01□□□□□ -1.29
HMCN1Q96RW7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 RNA5SP413-201ENST00000516373 109 ntBASIC7.01□□□□□ -1.29
HMCN1Q96RW7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 DUX4L16-201ENST00000555130 1264 ntBASIC7.01□□□□□ -1.29
HMCN1Q96RW7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 AC090877.2-201ENST00000558441 1738 ntBASIC7.01□□□□□ -1.29
HMCN1Q96RW7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMCN1Q96RW7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMCN1Q96RW7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HMCN1Q96RW7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC7□□□□□ -1.29
HMCN1Q96RW7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms