Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 DUX4L7-201ENST00000630678 1275 ntBASIC21.51■■□□□ 1.03
SLC46A1Q96NT5 DUX4L5-201ENST00000630834 1275 ntBASIC21.51■■□□□ 1.03
SLC46A1Q96NT5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC46A1Q96NT5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 AC092437.1-201ENST00000624794 1048 ntBASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.5■■□□□ 1.03
SLC46A1Q96NT5 AL139125.2-201ENST00000623134 1869 ntBASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 AC123595.1-201ENST00000440769 1046 ntBASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SLC46A1Q96NT5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 AC027612.3-201ENST00000413684 1047 ntBASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC46A1Q96NT5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
SLC46A1Q96NT5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 AL161729.1-201ENST00000604104 1402 ntBASIC21.46■■□□□ 1.03
SLC46A1Q96NT5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 AC141586.4-201ENST00000624558 1573 ntBASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC46A1Q96NT5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC46A1Q96NT5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 MIR572-201ENST00000384983 95 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms