Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF48Q96MX3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF48Q96MX3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF48Q96MX3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF48Q96MX3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF48Q96MX3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF48Q96MX3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF48Q96MX3 ALDH1A3-203ENST00000557963 1670 ntBASIC18.22■□□□□ 0.51
ZNF48Q96MX3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 AC233992.3-201ENST00000607491 485 ntBASIC18.21■□□□□ 0.51
ZNF48Q96MX3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF48Q96MX3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.21■□□□□ 0.5
ZNF48Q96MX3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 BX842568.3-201ENST00000418104 571 ntBASIC18.2■□□□□ 0.5
ZNF48Q96MX3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 pRNA.6-201ENST00000610482 90 ntBASIC18.2■□□□□ 0.5
ZNF48Q96MX3 pRNA.5-201ENST00000612139 90 ntBASIC18.2■□□□□ 0.5
ZNF48Q96MX3 pRNA.11-201ENST00000618423 90 ntBASIC18.2■□□□□ 0.5
ZNF48Q96MX3 pRNA.13-201ENST00000619112 90 ntBASIC18.2■□□□□ 0.5
ZNF48Q96MX3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF48Q96MX3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF48Q96MX3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.18■□□□□ 0.5
ZNF48Q96MX3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF48Q96MX3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.17■□□□□ 0.5
ZNF48Q96MX3 AL162430.1-201ENST00000480705 870 ntBASIC18.17■□□□□ 0.5
ZNF48Q96MX3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF48Q96MX3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF48Q96MX3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF48Q96MX3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ZNF48Q96MX3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.15■□□□□ 0.5
ZNF48Q96MX3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF48Q96MX3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF48Q96MX3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ZNF48Q96MX3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
ZNF48Q96MX3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF48Q96MX3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF48Q96MX3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF48Q96MX3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF48Q96MX3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ZNF48Q96MX3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
ZNF48Q96MX3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF48Q96MX3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms