Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
SEH1LQ96EE3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 AC137767.1-201ENST00000602918 1920 ntBASIC19.4■□□□□ 0.7
SEH1LQ96EE3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEH1LQ96EE3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SEH1LQ96EE3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 AC009299.2-201ENST00000482477 511 ntBASIC19.39■□□□□ 0.69
SEH1LQ96EE3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 AC131274.2-201ENST00000580697 1507 ntBASIC19.39■□□□□ 0.69
SEH1LQ96EE3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEH1LQ96EE3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.38■□□□□ 0.69
SEH1LQ96EE3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SEH1LQ96EE3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 AC137630.3-201ENST00000607245 391 ntBASIC19.36■□□□□ 0.69
SEH1LQ96EE3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEH1LQ96EE3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 AL161729.1-201ENST00000604104 1402 ntBASIC19.35■□□□□ 0.69
SEH1LQ96EE3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms