Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.72■■□□□ 1.23
CLDN23Q96B33 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.72■■□□□ 1.23
CLDN23Q96B33 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CLDN23Q96B33 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CLDN23Q96B33 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CLDN23Q96B33 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLDN23Q96B33 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.71■■□□□ 1.23
CLDN23Q96B33 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.71■■□□□ 1.23
CLDN23Q96B33 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.71■■□□□ 1.23
CLDN23Q96B33 KRT18P61-201ENST00000585825 1298 ntBASIC22.71■■□□□ 1.23
CLDN23Q96B33 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.71■■□□□ 1.23
CLDN23Q96B33 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.71■■□□□ 1.23
CLDN23Q96B33 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.71■■□□□ 1.23
CLDN23Q96B33 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLDN23Q96B33 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.71■■□□□ 1.23
CLDN23Q96B33 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CLDN23Q96B33 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.23
CLDN23Q96B33 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.7■■□□□ 1.22
CLDN23Q96B33 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CLDN23Q96B33 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.7■■□□□ 1.22
CLDN23Q96B33 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CLDN23Q96B33 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CLDN23Q96B33 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLDN23Q96B33 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CLDN23Q96B33 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.69■■□□□ 1.22
CLDN23Q96B33 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLDN23Q96B33 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.69■■□□□ 1.22
CLDN23Q96B33 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLDN23Q96B33 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.69■■□□□ 1.22
CLDN23Q96B33 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.69■■□□□ 1.22
CLDN23Q96B33 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLDN23Q96B33 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.69■■□□□ 1.22
CLDN23Q96B33 AC073111.5-205ENST00000641717 521 ntBASIC22.69■■□□□ 1.22
CLDN23Q96B33 AC105233.4-201ENST00000642045 216 ntBASIC22.69■■□□□ 1.22
CLDN23Q96B33 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLDN23Q96B33 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLDN23Q96B33 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.68■■□□□ 1.22
CLDN23Q96B33 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CLDN23Q96B33 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLDN23Q96B33 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLDN23Q96B33 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLDN23Q96B33 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.68■■□□□ 1.22
CLDN23Q96B33 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CLDN23Q96B33 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.68■■□□□ 1.22
CLDN23Q96B33 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLDN23Q96B33 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.68■■□□□ 1.22
CLDN23Q96B33 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.67■■□□□ 1.22
CLDN23Q96B33 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN23Q96B33 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN23Q96B33 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN23Q96B33 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN23Q96B33 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.67■■□□□ 1.22
CLDN23Q96B33 AC016769.1-201ENST00000409132 1010 ntBASIC22.67■■□□□ 1.22
CLDN23Q96B33 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN23Q96B33 HLA-L-211ENST00000482052 1765 ntBASIC22.67■■□□□ 1.22
CLDN23Q96B33 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CLDN23Q96B33 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN23Q96B33 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN23Q96B33 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN23Q96B33 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CLDN23Q96B33 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN23Q96B33 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN23Q96B33 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.66■■□□□ 1.22
CLDN23Q96B33 FP325331.1-202ENST00000623531 1380 ntBASIC22.66■■□□□ 1.22
CLDN23Q96B33 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CLDN23Q96B33 AC137761.2-201ENST00000561729 223 ntBASIC22.66■■□□□ 1.22
CLDN23Q96B33 AC145350.3-201ENST00000569033 163 ntBASIC22.66■■□□□ 1.22
CLDN23Q96B33 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.66■■□□□ 1.22
CLDN23Q96B33 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN23Q96B33 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN23Q96B33 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN23Q96B33 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN23Q96B33 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN23Q96B33 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN23Q96B33 AC026185.1-201ENST00000445748 174 ntBASIC22.65■■□□□ 1.22
CLDN23Q96B33 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.65■■□□□ 1.22
CLDN23Q96B33 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN23Q96B33 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN23Q96B33 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN23Q96B33 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN23Q96B33 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CLDN23Q96B33 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLDN23Q96B33 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
CLDN23Q96B33 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CLDN23Q96B33 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLDN23Q96B33 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLDN23Q96B33 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLDN23Q96B33 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.64■■□□□ 1.21
CLDN23Q96B33 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.64■■□□□ 1.21
CLDN23Q96B33 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms