Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE4Q96A23 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE4Q96A23 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE4Q96A23 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE4Q96A23 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE4Q96A23 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE4Q96A23 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE4Q96A23 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE4Q96A23 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE4Q96A23 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE4Q96A23 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE4Q96A23 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE4Q96A23 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE4Q96A23 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE4Q96A23 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE4Q96A23 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE4Q96A23 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CPNE4Q96A23 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE4Q96A23 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE4Q96A23 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE4Q96A23 SYT6-210ENST00000641643 1587 ntBASIC20.05■□□□□ 0.8
CPNE4Q96A23 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE4Q96A23 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
CPNE4Q96A23 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE4Q96A23 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE4Q96A23 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE4Q96A23 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CPNE4Q96A23 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE4Q96A23 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 LINC01529-204ENST00000636474 1715 ntBASIC20.04■□□□□ 0.8
CPNE4Q96A23 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE4Q96A23 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE4Q96A23 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE4Q96A23 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE4Q96A23 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE4Q96A23 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE4Q96A23 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE4Q96A23 AC096631.2-201ENST00000436136 790 ntBASIC20.03■□□□□ 0.8
CPNE4Q96A23 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.03■□□□□ 0.8
CPNE4Q96A23 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE4Q96A23 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE4Q96A23 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CPNE4Q96A23 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE4Q96A23 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CPNE4Q96A23 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CPNE4Q96A23 AC079630.1-202ENST00000618127 1840 ntBASIC20.02■□□□□ 0.8
CPNE4Q96A23 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.02■□□□□ 0.8
CPNE4Q96A23 DUX4L4-201ENST00000566884 1269 ntBASIC20.02■□□□□ 0.8
CPNE4Q96A23 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.02■□□□□ 0.8
CPNE4Q96A23 AL138724.1-201ENST00000606771 1088 ntBASIC20.02■□□□□ 0.8
CPNE4Q96A23 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE4Q96A23 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE4Q96A23 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE4Q96A23 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CPNE4Q96A23 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.02■□□□□ 0.79
CPNE4Q96A23 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CPNE4Q96A23 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPNE4Q96A23 UNC93B3-201ENST00000308076 687 ntBASIC20.01■□□□□ 0.79
CPNE4Q96A23 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE4Q96A23 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE4Q96A23 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE4Q96A23 AL139246.5-201ENST00000606645 996 ntBASIC20.01■□□□□ 0.79
CPNE4Q96A23 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CPNE4Q96A23 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE4Q96A23 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPNE4Q96A23 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20■□□□□ 0.79
CPNE4Q96A23 PTCHD3P2-201ENST00000424937 1205 ntBASIC20■□□□□ 0.79
CPNE4Q96A23 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20■□□□□ 0.79
CPNE4Q96A23 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE4Q96A23 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPNE4Q96A23 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CPNE4Q96A23 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20■□□□□ 0.79
CPNE4Q96A23 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CPNE4Q96A23 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE4Q96A23 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE4Q96A23 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE4Q96A23 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE4Q96A23 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.99■□□□□ 0.79
CPNE4Q96A23 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE4Q96A23 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CPNE4Q96A23 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE4Q96A23 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE4Q96A23 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms