Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCD2Q92925 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCD2Q92925 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCD2Q92925 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCD2Q92925 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCD2Q92925 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.22■■□□□ 1.31
SMARCD2Q92925 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.22■■□□□ 1.31
SMARCD2Q92925 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCD2Q92925 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.22■■□□□ 1.31
SMARCD2Q92925 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCD2Q92925 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.22■■□□□ 1.31
SMARCD2Q92925 IKBKGP1-201ENST00000612193 1073 ntBASIC23.22■■□□□ 1.31
SMARCD2Q92925 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.22■■□□□ 1.31
SMARCD2Q92925 MIR6084-201ENST00000622012 110 ntBASIC23.22■■□□□ 1.31
SMARCD2Q92925 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCD2Q92925 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCD2Q92925 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.22■■□□□ 1.31
SMARCD2Q92925 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCD2Q92925 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
SMARCD2Q92925 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.21■■□□□ 1.31
SMARCD2Q92925 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCD2Q92925 DUX4L4-201ENST00000566884 1269 ntBASIC23.21■■□□□ 1.31
SMARCD2Q92925 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.21■■□□□ 1.31
SMARCD2Q92925 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCD2Q92925 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SMARCD2Q92925 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SMARCD2Q92925 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCD2Q92925 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCD2Q92925 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.21■■□□□ 1.31
SMARCD2Q92925 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCD2Q92925 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCD2Q92925 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.21■■□□□ 1.31
SMARCD2Q92925 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
SMARCD2Q92925 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCD2Q92925 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCD2Q92925 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCD2Q92925 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SMARCD2Q92925 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCD2Q92925 OR2I1P-207ENST00000453522 948 ntBASIC23.2■■□□□ 1.3
SMARCD2Q92925 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.2■■□□□ 1.3
SMARCD2Q92925 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.2■■□□□ 1.3
SMARCD2Q92925 AC010525.1-201ENST00000585559 441 ntBASIC23.2■■□□□ 1.3
SMARCD2Q92925 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCD2Q92925 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCD2Q92925 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCD2Q92925 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCD2Q92925 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.19■■□□□ 1.3
SMARCD2Q92925 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCD2Q92925 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCD2Q92925 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SMARCD2Q92925 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCD2Q92925 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.19■■□□□ 1.3
SMARCD2Q92925 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCD2Q92925 RARRES2P11-201ENST00000635158 484 ntBASIC23.19■■□□□ 1.3
SMARCD2Q92925 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCD2Q92925 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCD2Q92925 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCD2Q92925 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
SMARCD2Q92925 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCD2Q92925 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCD2Q92925 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.18■■□□□ 1.3
SMARCD2Q92925 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCD2Q92925 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCD2Q92925 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.18■■□□□ 1.3
SMARCD2Q92925 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.18■■□□□ 1.3
SMARCD2Q92925 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCD2Q92925 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCD2Q92925 AL137784.2-201ENST00000607332 1000 ntBASIC23.18■■□□□ 1.3
SMARCD2Q92925 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.18■■□□□ 1.3
SMARCD2Q92925 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCD2Q92925 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCD2Q92925 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCD2Q92925 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCD2Q92925 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCD2Q92925 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCD2Q92925 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SMARCD2Q92925 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCD2Q92925 AC090192.1-201ENST00000517740 490 ntBASIC23.17■■□□□ 1.3
SMARCD2Q92925 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SMARCD2Q92925 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.17■■□□□ 1.3
SMARCD2Q92925 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SMARCD2Q92925 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCD2Q92925 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCD2Q92925 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCD2Q92925 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCD2Q92925 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.16■■□□□ 1.3
SMARCD2Q92925 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCD2Q92925 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCD2Q92925 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCD2Q92925 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCD2Q92925 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCD2Q92925 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCD2Q92925 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCD2Q92925 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SMARCD2Q92925 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCD2Q92925 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SMARCD2Q92925 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCD2Q92925 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCD2Q92925 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.15■■□□□ 1.3
SMARCD2Q92925 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms