Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.24■□□□□ 0.83
HPS1Q92902 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HPS1Q92902 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
HPS1Q92902 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 AC009299.2-201ENST00000482477 511 ntBASIC20.24■□□□□ 0.83
HPS1Q92902 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 GUSBP5-202ENST00000510805 1989 ntBASIC20.24■□□□□ 0.83
HPS1Q92902 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HPS1Q92902 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS1Q92902 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.23■□□□□ 0.83
HPS1Q92902 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS1Q92902 AC087393.1-201ENST00000582896 145 ntBASIC20.23■□□□□ 0.83
HPS1Q92902 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS1Q92902 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS1Q92902 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HPS1Q92902 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.23■□□□□ 0.83
HPS1Q92902 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.23■□□□□ 0.83
HPS1Q92902 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS1Q92902 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS1Q92902 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HPS1Q92902 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS1Q92902 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
HPS1Q92902 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HPS1Q92902 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.22■□□□□ 0.83
HPS1Q92902 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HPS1Q92902 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS1Q92902 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS1Q92902 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS1Q92902 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS1Q92902 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.22■□□□□ 0.83
HPS1Q92902 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS1Q92902 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.21■□□□□ 0.83
HPS1Q92902 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HPS1Q92902 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HPS1Q92902 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.21■□□□□ 0.83
HPS1Q92902 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS1Q92902 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HPS1Q92902 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.21■□□□□ 0.83
HPS1Q92902 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HPS1Q92902 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS1Q92902 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS1Q92902 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS1Q92902 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HPS1Q92902 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.2■□□□□ 0.82
HPS1Q92902 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HPS1Q92902 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS1Q92902 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
HPS1Q92902 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.2■□□□□ 0.82
HPS1Q92902 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HPS1Q92902 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS1Q92902 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.2■□□□□ 0.82
HPS1Q92902 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HPS1Q92902 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS1Q92902 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS1Q92902 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.2■□□□□ 0.82
HPS1Q92902 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.2■□□□□ 0.82
HPS1Q92902 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
HPS1Q92902 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
HPS1Q92902 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HPS1Q92902 RPS2P7-201ENST00000447334 885 ntBASIC20.19■□□□□ 0.82
HPS1Q92902 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS1Q92902 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS1Q92902 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS1Q92902 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.18■□□□□ 0.82
HPS1Q92902 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.18■□□□□ 0.82
HPS1Q92902 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HPS1Q92902 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HPS1Q92902 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HPS1Q92902 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.18■□□□□ 0.82
HPS1Q92902 AL031848.2-201ENST00000607670 837 ntBASIC20.18■□□□□ 0.82
HPS1Q92902 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HPS1Q92902 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HPS1Q92902 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HPS1Q92902 ECEL1P1-201ENST00000373592 1742 ntBASIC20.17■□□□□ 0.82
HPS1Q92902 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HPS1Q92902 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HPS1Q92902 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HPS1Q92902 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HPS1Q92902 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
HPS1Q92902 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HPS1Q92902 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HPS1Q92902 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HPS1Q92902 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.17■□□□□ 0.82
HPS1Q92902 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms