Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 AC103834.1-201ENST00000520383 144 ntBASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 ECEL1P1-201ENST00000373592 1742 ntBASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4IP1Q8WWV3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTN4IP1Q8WWV3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RTN4IP1Q8WWV3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.77■□□□□ 0.59
RTN4IP1Q8WWV3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RTN4IP1Q8WWV3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4IP1Q8WWV3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 AC103724.3-201ENST00000564481 992 ntBASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4IP1Q8WWV3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4IP1Q8WWV3 MIR4281-201ENST00000580852 62 ntBASIC18.74■□□□□ 0.59
RTN4IP1Q8WWV3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RTN4IP1Q8WWV3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4IP1Q8WWV3 AC137767.1-201ENST00000602918 1920 ntBASIC18.74■□□□□ 0.59
RTN4IP1Q8WWV3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RTN4IP1Q8WWV3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RTN4IP1Q8WWV3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4IP1Q8WWV3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.73■□□□□ 0.59
RTN4IP1Q8WWV3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4IP1Q8WWV3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.73■□□□□ 0.59
RTN4IP1Q8WWV3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4IP1Q8WWV3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4IP1Q8WWV3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4IP1Q8WWV3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4IP1Q8WWV3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 AL022069.1-201ENST00000568025 1636 ntBASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms