Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.5■□□□□ 0.87
TRUB1Q8WWH5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB1Q8WWH5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.5■□□□□ 0.87
TRUB1Q8WWH5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.5■□□□□ 0.87
TRUB1Q8WWH5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB1Q8WWH5 AC242852.2-201ENST00000615738 1807 ntBASIC20.5■□□□□ 0.87
TRUB1Q8WWH5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.5■□□□□ 0.87
TRUB1Q8WWH5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB1Q8WWH5 PKD1P6-201ENST00000343738 4769 ntBASIC20.49■□□□□ 0.87
TRUB1Q8WWH5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB1Q8WWH5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.49■□□□□ 0.87
TRUB1Q8WWH5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB1Q8WWH5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRUB1Q8WWH5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB1Q8WWH5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 MIR639-201ENST00000384974 98 ntBASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB1Q8WWH5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 RNF165-205ENST00000588679 2904 ntBASIC20.47■□□□□ 0.87
TRUB1Q8WWH5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRUB1Q8WWH5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRUB1Q8WWH5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRUB1Q8WWH5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRUB1Q8WWH5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRUB1Q8WWH5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRUB1Q8WWH5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRUB1Q8WWH5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.46■□□□□ 0.87
TRUB1Q8WWH5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.46■□□□□ 0.87
TRUB1Q8WWH5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRUB1Q8WWH5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.45■□□□□ 0.87
TRUB1Q8WWH5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 ALDH1A3-203ENST00000557963 1670 ntBASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRUB1Q8WWH5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRUB1Q8WWH5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRUB1Q8WWH5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.44■□□□□ 0.86
TRUB1Q8WWH5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRUB1Q8WWH5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRUB1Q8WWH5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.44■□□□□ 0.86
TRUB1Q8WWH5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRUB1Q8WWH5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB1Q8WWH5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms