Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM40Q8WWA1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.57■■□□□ 1.52
TMEM40Q8WWA1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM40Q8WWA1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM40Q8WWA1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.57■■□□□ 1.52
TMEM40Q8WWA1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.57■■□□□ 1.52
TMEM40Q8WWA1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TMEM40Q8WWA1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM40Q8WWA1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 LINC01124-201ENST00000409786 2117 ntBASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 AC104564.3-201ENST00000582367 638 ntBASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 TSPY26P-201ENST00000476365 1326 ntBASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM40Q8WWA1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 DUX4L4-201ENST00000566884 1269 ntBASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 AC010525.1-201ENST00000585559 441 ntBASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 AC004812.2-201ENST00000611079 2094 ntBASIC24.54■■□□□ 1.52
TMEM40Q8WWA1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 AL162430.1-201ENST00000480705 870 ntBASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 FP325331.1-202ENST00000623531 1380 ntBASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM40Q8WWA1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 LINC00543-201ENST00000567234 1845 ntBASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 AC144652.1-201ENST00000609974 1624 ntBASIC24.52■■□□□ 1.52
TMEM40Q8WWA1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEM40Q8WWA1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEM40Q8WWA1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.51■■□□□ 1.51
TMEM40Q8WWA1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.51■■□□□ 1.51
TMEM40Q8WWA1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.51■■□□□ 1.51
TMEM40Q8WWA1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEM40Q8WWA1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEM40Q8WWA1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 AL139125.2-201ENST00000623134 1869 ntBASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TMEM40Q8WWA1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 IGHV3-19-201ENST00000521488 291 ntBASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms