Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 C11orf96-202ENST00000528572 1834 ntBASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 AC092053.2-201ENST00000640557 1818 ntBASIC20.74■□□□□ 0.91
ZNF555Q8NEP9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 AC090877.2-201ENST00000558441 1738 ntBASIC20.73■□□□□ 0.91
ZNF555Q8NEP9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF555Q8NEP9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF555Q8NEP9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF555Q8NEP9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF555Q8NEP9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF555Q8NEP9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ZNF555Q8NEP9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF555Q8NEP9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF555Q8NEP9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF555Q8NEP9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF555Q8NEP9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF555Q8NEP9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 AL022069.1-201ENST00000568025 1636 ntBASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 ZNRF2P2-203ENST00000454624 420 ntBASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF555Q8NEP9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 AC092296.2-201ENST00000589470 999 ntBASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF555Q8NEP9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 323.4 ms