Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.56■□□□□ 0.72
CPEB3Q8NE35 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPEB3Q8NE35 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.55■□□□□ 0.72
CPEB3Q8NE35 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPEB3Q8NE35 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 AC131212.1-201ENST00000613771 668 ntBASIC19.54■□□□□ 0.72
CPEB3Q8NE35 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPEB3Q8NE35 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 AC144652.1-201ENST00000609974 1624 ntBASIC19.53■□□□□ 0.72
CPEB3Q8NE35 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPEB3Q8NE35 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 C17orf82-201ENST00000623772 1530 ntBASIC19.52■□□□□ 0.72
CPEB3Q8NE35 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPEB3Q8NE35 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CPEB3Q8NE35 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.52■□□□□ 0.71
CPEB3Q8NE35 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 DUSP8P3-201ENST00000399571 1760 ntBASIC19.51■□□□□ 0.71
CPEB3Q8NE35 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 AL353803.4-201ENST00000565882 1934 ntBASIC19.51■□□□□ 0.71
CPEB3Q8NE35 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.51■□□□□ 0.71
CPEB3Q8NE35 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms