Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 FP325331.1-202ENST00000623531 1380 ntBASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
SLC4A11Q8NBS3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 AL136116.3-201ENST00000402907 1138 ntBASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 SRD5A1P1-201ENST00000442297 786 ntBASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SLC4A11Q8NBS3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SLC4A11Q8NBS3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SLC4A11Q8NBS3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SLC4A11Q8NBS3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 AL353803.4-201ENST00000565882 1934 ntBASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.82■■□□□ 1.4
SLC4A11Q8NBS3 AC008406.3-201ENST00000620001 1374 ntBASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 AC099791.2-201ENST00000605725 427 ntBASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 LINC01529-204ENST00000636474 1715 ntBASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC4A11Q8NBS3 DUSP8P3-201ENST00000399571 1760 ntBASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 DUX4L4-201ENST00000566884 1269 ntBASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 DUSP8P5-201ENST00000422884 1815 ntBASIC23.8■■□□□ 1.4
SLC4A11Q8NBS3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC4A11Q8NBS3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC4A11Q8NBS3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.79■■□□□ 1.4
SLC4A11Q8NBS3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC4A11Q8NBS3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.79■■□□□ 1.4
SLC4A11Q8NBS3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 AC006455.2-201ENST00000429931 906 ntBASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 AC241377.3-202ENST00000626088 1088 ntBASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 AC241585.3-202ENST00000628937 1088 ntBASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 AC245100.8-202ENST00000629247 1058 ntBASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
SLC4A11Q8NBS3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SLC4A11Q8NBS3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SLC4A11Q8NBS3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A11Q8NBS3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A11Q8NBS3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A11Q8NBS3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A11Q8NBS3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC4A11Q8NBS3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
SLC4A11Q8NBS3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC4A11Q8NBS3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC4A11Q8NBS3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.75■■□□□ 1.39
SLC4A11Q8NBS3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.75■■□□□ 1.39
SLC4A11Q8NBS3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms