Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIML2Q8N7C3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRIML2Q8N7C3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TRIML2Q8N7C3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIML2Q8N7C3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIML2Q8N7C3 DUX4L18-201ENST00000553347 1267 ntBASIC21.51■■□□□ 1.03
TRIML2Q8N7C3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIML2Q8N7C3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIML2Q8N7C3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIML2Q8N7C3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 BHLHE23-202ENST00000612929 1109 ntBASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 ANOS2P-203ENST00000472227 1816 ntBASIC21.5■■□□□ 1.03
TRIML2Q8N7C3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 AC074183.2-201ENST00000623112 922 ntBASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIML2Q8N7C3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 LINC00526-201ENST00000581067 1875 ntBASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIML2Q8N7C3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIML2Q8N7C3 AC092068.2-201ENST00000590491 1708 ntBASIC21.47■■□□□ 1.03
TRIML2Q8N7C3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIML2Q8N7C3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIML2Q8N7C3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 AC127496.7-201ENST00000625110 1798 ntBASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 AC007375.3-201ENST00000600936 2314 ntBASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 ALDH1A3-203ENST00000557963 1670 ntBASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRIML2Q8N7C3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
TRIML2Q8N7C3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 AC131274.2-201ENST00000580697 1507 ntBASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIML2Q8N7C3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIML2Q8N7C3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIML2Q8N7C3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIML2Q8N7C3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIML2Q8N7C3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIML2Q8N7C3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIML2Q8N7C3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIML2Q8N7C3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIML2Q8N7C3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIML2Q8N7C3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 SLC25A24-204ENST00000569674 2357 ntBASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms