Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.87■■■□□ 2.05
SMC5Q8IY18 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
SMC5Q8IY18 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.87■■■□□ 2.05
SMC5Q8IY18 RARRES2P1-201ENST00000474487 481 ntBASIC27.87■■■□□ 2.05
SMC5Q8IY18 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.87■■■□□ 2.05
SMC5Q8IY18 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SMC5Q8IY18 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.87■■■□□ 2.05
SMC5Q8IY18 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SMC5Q8IY18 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
SMC5Q8IY18 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SMC5Q8IY18 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
SMC5Q8IY18 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SMC5Q8IY18 AC092028.1-203ENST00000608262 953 ntBASIC27.86■■■□□ 2.05
SMC5Q8IY18 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.86■■■□□ 2.05
SMC5Q8IY18 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.86■■■□□ 2.05
SMC5Q8IY18 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
SMC5Q8IY18 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
SMC5Q8IY18 AC005703.6-201ENST00000623265 1329 ntBASIC27.86■■■□□ 2.05
SMC5Q8IY18 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
SMC5Q8IY18 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
SMC5Q8IY18 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC27.85■■■□□ 2.05
SMC5Q8IY18 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
SMC5Q8IY18 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SMC5Q8IY18 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SMC5Q8IY18 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SMC5Q8IY18 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SMC5Q8IY18 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SMC5Q8IY18 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC27.84■■■□□ 2.05
SMC5Q8IY18 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SMC5Q8IY18 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.84■■■□□ 2.05
SMC5Q8IY18 Z92544.1-202ENST00000571933 1220 ntBASIC27.84■■■□□ 2.05
SMC5Q8IY18 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
SMC5Q8IY18 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SMC5Q8IY18 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.84■■■□□ 2.05
SMC5Q8IY18 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
SMC5Q8IY18 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.84■■■□□ 2.05
SMC5Q8IY18 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SMC5Q8IY18 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SMC5Q8IY18 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SMC5Q8IY18 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.83■■■□□ 2.05
SMC5Q8IY18 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.83■■■□□ 2.05
SMC5Q8IY18 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
SMC5Q8IY18 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMC5Q8IY18 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SMC5Q8IY18 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
SMC5Q8IY18 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMC5Q8IY18 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMC5Q8IY18 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC27.82■■■□□ 2.04
SMC5Q8IY18 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
SMC5Q8IY18 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMC5Q8IY18 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMC5Q8IY18 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
SMC5Q8IY18 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMC5Q8IY18 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SMC5Q8IY18 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMC5Q8IY18 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
SMC5Q8IY18 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMC5Q8IY18 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.81■■■□□ 2.04
SMC5Q8IY18 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMC5Q8IY18 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMC5Q8IY18 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMC5Q8IY18 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
SMC5Q8IY18 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SMC5Q8IY18 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.81■■■□□ 2.04
SMC5Q8IY18 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
SMC5Q8IY18 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMC5Q8IY18 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SMC5Q8IY18 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.8■■■□□ 2.04
SMC5Q8IY18 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.8■■■□□ 2.04
SMC5Q8IY18 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.8■■■□□ 2.04
SMC5Q8IY18 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SMC5Q8IY18 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SMC5Q8IY18 GUSBP5-202ENST00000510805 1989 ntBASIC27.79■■■□□ 2.04
SMC5Q8IY18 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.79■■■□□ 2.04
SMC5Q8IY18 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SMC5Q8IY18 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SMC5Q8IY18 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMC5Q8IY18 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.78■■■□□ 2.04
SMC5Q8IY18 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC27.78■■■□□ 2.04
SMC5Q8IY18 EP400NL-214ENST00000641289 2402 ntBASIC27.78■■■□□ 2.04
SMC5Q8IY18 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC27.78■■■□□ 2.04
SMC5Q8IY18 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMC5Q8IY18 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.78■■■□□ 2.04
SMC5Q8IY18 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
SMC5Q8IY18 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.78■■■□□ 2.04
SMC5Q8IY18 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMC5Q8IY18 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
SMC5Q8IY18 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMC5Q8IY18 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMC5Q8IY18 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMC5Q8IY18 ASB1-202ENST00000409297 878 ntTSL 5 BASIC27.77■■■□□ 2.04
SMC5Q8IY18 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.77■■■□□ 2.04
SMC5Q8IY18 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SMC5Q8IY18 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMC5Q8IY18 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMC5Q8IY18 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
SMC5Q8IY18 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMC5Q8IY18 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMC5Q8IY18 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.04
SMC5Q8IY18 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms