Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC28Q86X40 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC28Q86X40 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LRRC28Q86X40 AL592295.1-201ENST00000400984 884 ntBASIC19.85■□□□□ 0.77
LRRC28Q86X40 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.85■□□□□ 0.77
LRRC28Q86X40 AL031848.2-201ENST00000607670 837 ntBASIC19.85■□□□□ 0.77
LRRC28Q86X40 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
LRRC28Q86X40 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC28Q86X40 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC28Q86X40 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC28Q86X40 PKD1P6-201ENST00000343738 4769 ntBASIC19.84■□□□□ 0.77
LRRC28Q86X40 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRRC28Q86X40 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LRRC28Q86X40 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC28Q86X40 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC28Q86X40 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC28Q86X40 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC28Q86X40 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC28Q86X40 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC28Q86X40 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC28Q86X40 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC28Q86X40 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC28Q86X40 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.83■□□□□ 0.77
LRRC28Q86X40 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC28Q86X40 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC28Q86X40 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
LRRC28Q86X40 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC28Q86X40 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC28Q86X40 KRT18P24-201ENST00000344739 1156 ntBASIC19.82■□□□□ 0.76
LRRC28Q86X40 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRRC28Q86X40 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC28Q86X40 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC28Q86X40 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC28Q86X40 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC28Q86X40 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRRC28Q86X40 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC28Q86X40 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRRC28Q86X40 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC28Q86X40 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC28Q86X40 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC28Q86X40 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC28Q86X40 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
LRRC28Q86X40 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC28Q86X40 AC242852.2-201ENST00000615738 1807 ntBASIC19.81■□□□□ 0.76
LRRC28Q86X40 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC28Q86X40 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
LRRC28Q86X40 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC28Q86X40 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC28Q86X40 AL035685.1-201ENST00000636663 812 ntBASIC19.81■□□□□ 0.76
LRRC28Q86X40 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC28Q86X40 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC28Q86X40 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LRRC28Q86X40 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC28Q86X40 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC28Q86X40 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC28Q86X40 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC28Q86X40 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LRRC28Q86X40 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LRRC28Q86X40 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC28Q86X40 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LRRC28Q86X40 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC28Q86X40 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC28Q86X40 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC28Q86X40 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC28Q86X40 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC28Q86X40 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC28Q86X40 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC28Q86X40 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC28Q86X40 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC28Q86X40 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC28Q86X40 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC28Q86X40 AC009299.2-201ENST00000482477 511 ntBASIC19.79■□□□□ 0.76
LRRC28Q86X40 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.79■□□□□ 0.76
LRRC28Q86X40 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.79■□□□□ 0.76
LRRC28Q86X40 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC28Q86X40 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC28Q86X40 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC28Q86X40 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC28Q86X40 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LRRC28Q86X40 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC28Q86X40 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC28Q86X40 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LRRC28Q86X40 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
LRRC28Q86X40 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LRRC28Q86X40 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC28Q86X40 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC28Q86X40 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LRRC28Q86X40 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC28Q86X40 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC28Q86X40 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRC28Q86X40 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC28Q86X40 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC28Q86X40 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC28Q86X40 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC28Q86X40 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LRRC28Q86X40 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms