Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NLRC3Q7RTR2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NLRC3Q7RTR2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.46■□□□□ 0.71
NLRC3Q7RTR2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 MIR4787-201ENST00000607364 84 ntBASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 AL137060.1-201ENST00000618151 2648 ntBASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NLRC3Q7RTR2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 GUSBP5-201ENST00000418136 578 ntBASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 ECEL1P1-201ENST00000373592 1742 ntBASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC3Q7RTR2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC3Q7RTR2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC3Q7RTR2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC3Q7RTR2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
NLRC3Q7RTR2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NLRC3Q7RTR2 AC021242.3-201ENST00000607598 1377 ntBASIC19.43■□□□□ 0.7
NLRC3Q7RTR2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC3Q7RTR2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC3Q7RTR2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC3Q7RTR2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 DUSP8P3-201ENST00000399571 1760 ntBASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms