Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHFQ7M4L6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.19■□□□□ 0.82
SHFQ7M4L6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.19■□□□□ 0.82
SHFQ7M4L6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHFQ7M4L6 AC007375.3-201ENST00000600936 2314 ntBASIC20.19■□□□□ 0.82
SHFQ7M4L6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHFQ7M4L6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
SHFQ7M4L6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.18■□□□□ 0.82
SHFQ7M4L6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHFQ7M4L6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHFQ7M4L6 NTF6A-201ENST00000591175 560 ntBASIC20.18■□□□□ 0.82
SHFQ7M4L6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SHFQ7M4L6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHFQ7M4L6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHFQ7M4L6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHFQ7M4L6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SHFQ7M4L6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SHFQ7M4L6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SHFQ7M4L6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.17■□□□□ 0.82
SHFQ7M4L6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHFQ7M4L6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHFQ7M4L6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHFQ7M4L6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHFQ7M4L6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.17■□□□□ 0.82
SHFQ7M4L6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHFQ7M4L6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.17■□□□□ 0.82
SHFQ7M4L6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHFQ7M4L6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHFQ7M4L6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHFQ7M4L6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHFQ7M4L6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
SHFQ7M4L6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.16■□□□□ 0.82
SHFQ7M4L6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHFQ7M4L6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SHFQ7M4L6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHFQ7M4L6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHFQ7M4L6 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.16■□□□□ 0.82
SHFQ7M4L6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHFQ7M4L6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
SHFQ7M4L6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SHFQ7M4L6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SHFQ7M4L6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHFQ7M4L6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHFQ7M4L6 AC127496.7-201ENST00000625110 1798 ntBASIC20.16■□□□□ 0.82
SHFQ7M4L6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHFQ7M4L6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHFQ7M4L6 DUX4L18-201ENST00000553347 1267 ntBASIC20.15■□□□□ 0.82
SHFQ7M4L6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHFQ7M4L6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SHFQ7M4L6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.15■□□□□ 0.82
SHFQ7M4L6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHFQ7M4L6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SHFQ7M4L6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.14■□□□□ 0.81
SHFQ7M4L6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHFQ7M4L6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHFQ7M4L6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.14■□□□□ 0.81
SHFQ7M4L6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHFQ7M4L6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHFQ7M4L6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHFQ7M4L6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.14■□□□□ 0.81
SHFQ7M4L6 AC074183.2-201ENST00000623112 922 ntBASIC20.14■□□□□ 0.81
SHFQ7M4L6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHFQ7M4L6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.14■□□□□ 0.81
SHFQ7M4L6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.13■□□□□ 0.81
SHFQ7M4L6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.13■□□□□ 0.81
SHFQ7M4L6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHFQ7M4L6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHFQ7M4L6 BHLHE23-202ENST00000612929 1109 ntBASIC20.13■□□□□ 0.81
SHFQ7M4L6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
SHFQ7M4L6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHFQ7M4L6 AC079630.1-202ENST00000618127 1840 ntBASIC20.13■□□□□ 0.81
SHFQ7M4L6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHFQ7M4L6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.13■□□□□ 0.81
SHFQ7M4L6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.13■□□□□ 0.81
SHFQ7M4L6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.12■□□□□ 0.81
SHFQ7M4L6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.12■□□□□ 0.81
SHFQ7M4L6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.12■□□□□ 0.81
SHFQ7M4L6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.12■□□□□ 0.81
SHFQ7M4L6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SHFQ7M4L6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.12■□□□□ 0.81
SHFQ7M4L6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHFQ7M4L6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.11■□□□□ 0.81
SHFQ7M4L6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHFQ7M4L6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHFQ7M4L6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.11■□□□□ 0.81
SHFQ7M4L6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.11■□□□□ 0.81
SHFQ7M4L6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms