Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
COPS6Q7L5N1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.52■■■□□ 2.16
COPS6Q7L5N1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
COPS6Q7L5N1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
COPS6Q7L5N1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
COPS6Q7L5N1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
COPS6Q7L5N1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
COPS6Q7L5N1 SLC47A1P1-202ENST00000449666 945 ntBASIC28.51■■■□□ 2.15
COPS6Q7L5N1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.51■■■□□ 2.15
COPS6Q7L5N1 AL499627.2-201ENST00000606283 725 ntBASIC28.51■■■□□ 2.15
COPS6Q7L5N1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
COPS6Q7L5N1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
COPS6Q7L5N1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
COPS6Q7L5N1 AC133637.1-201ENST00000624115 1537 ntBASIC28.5■■■□□ 2.15
COPS6Q7L5N1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COPS6Q7L5N1 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.5■■■□□ 2.15
COPS6Q7L5N1 DUX4L4-201ENST00000566884 1269 ntBASIC28.5■■■□□ 2.15
COPS6Q7L5N1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
COPS6Q7L5N1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
COPS6Q7L5N1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
COPS6Q7L5N1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
COPS6Q7L5N1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.49■■■□□ 2.15
COPS6Q7L5N1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
COPS6Q7L5N1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.49■■■□□ 2.15
COPS6Q7L5N1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
COPS6Q7L5N1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.49■■■□□ 2.15
COPS6Q7L5N1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC28.49■■■□□ 2.15
COPS6Q7L5N1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COPS6Q7L5N1 AC144652.1-201ENST00000609974 1624 ntBASIC28.48■■■□□ 2.15
COPS6Q7L5N1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC28.48■■■□□ 2.15
COPS6Q7L5N1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.48■■■□□ 2.15
COPS6Q7L5N1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.48■■■□□ 2.15
COPS6Q7L5N1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.48■■■□□ 2.15
COPS6Q7L5N1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COPS6Q7L5N1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
COPS6Q7L5N1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COPS6Q7L5N1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COPS6Q7L5N1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
COPS6Q7L5N1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COPS6Q7L5N1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.46■■■□□ 2.15
COPS6Q7L5N1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COPS6Q7L5N1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COPS6Q7L5N1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COPS6Q7L5N1 AC126544.1-201ENST00000580842 1059 ntBASIC28.46■■■□□ 2.15
COPS6Q7L5N1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
COPS6Q7L5N1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
COPS6Q7L5N1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 MIR6821-201ENST00000617625 74 ntBASIC28.45■■■□□ 2.14
COPS6Q7L5N1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
COPS6Q7L5N1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 LINC01529-204ENST00000636474 1715 ntBASIC28.44■■■□□ 2.14
COPS6Q7L5N1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COPS6Q7L5N1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COPS6Q7L5N1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COPS6Q7L5N1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
COPS6Q7L5N1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COPS6Q7L5N1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COPS6Q7L5N1 AC097381.1-201ENST00000429019 1296 ntBASIC28.43■■■□□ 2.14
COPS6Q7L5N1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
COPS6Q7L5N1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.43■■■□□ 2.14
COPS6Q7L5N1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.43■■■□□ 2.14
COPS6Q7L5N1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 AC010525.1-201ENST00000585559 441 ntBASIC28.42■■■□□ 2.14
COPS6Q7L5N1 MIR5787-201ENST00000611784 55 ntBASIC28.42■■■□□ 2.14
COPS6Q7L5N1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 ABCB10P4-201ENST00000566803 2184 ntBASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms