Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST2H3AQ71DI3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST2H3AQ71DI3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST2H3AQ71DI3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST2H3AQ71DI3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST2H3AQ71DI3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST2H3AQ71DI3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HIST2H3AQ71DI3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
HIST2H3AQ71DI3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HIST2H3AQ71DI3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST2H3AQ71DI3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.64■□□□□ 0.74
HIST2H3AQ71DI3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST2H3AQ71DI3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST2H3AQ71DI3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 MTDHP2-201ENST00000601468 714 ntBASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 AC079834.2-201ENST00000609776 1949 ntBASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIST2H3AQ71DI3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 C9orf163-202ENST00000624034 2573 ntBASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST2H3AQ71DI3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 AC010997.5-201ENST00000609182 354 ntBASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 AC144652.1-201ENST00000609974 1624 ntBASIC19.62■□□□□ 0.73
HIST2H3AQ71DI3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HIST2H3AQ71DI3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HIST2H3AQ71DI3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST2H3AQ71DI3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.61■□□□□ 0.73
HIST2H3AQ71DI3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HIST2H3AQ71DI3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST2H3AQ71DI3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.6■□□□□ 0.73
HIST2H3AQ71DI3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST2H3AQ71DI3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.6■□□□□ 0.73
HIST2H3AQ71DI3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.6■□□□□ 0.73
HIST2H3AQ71DI3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
HIST2H3AQ71DI3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 AL353803.4-201ENST00000565882 1934 ntBASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 UNC93B8-201ENST00000511903 705 ntBASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 AL035685.1-201ENST00000636663 812 ntBASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST2H3AQ71DI3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST2H3AQ71DI3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
HIST2H3AQ71DI3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.58■□□□□ 0.73
HIST2H3AQ71DI3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST2H3AQ71DI3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST2H3AQ71DI3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST2H3AQ71DI3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HIST2H3AQ71DI3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.58■□□□□ 0.72
HIST2H3AQ71DI3 FP325331.1-202ENST00000623531 1380 ntBASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 TSPY9P-201ENST00000440215 945 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms