Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPH1Q70E73 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
RAPH1Q70E73 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.41■■□□□ 1.18
RAPH1Q70E73 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPH1Q70E73 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.41■■□□□ 1.18
RAPH1Q70E73 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPH1Q70E73 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPH1Q70E73 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RAPH1Q70E73 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAPH1Q70E73 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
RAPH1Q70E73 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPH1Q70E73 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPH1Q70E73 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
RAPH1Q70E73 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAPH1Q70E73 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPH1Q70E73 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPH1Q70E73 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPH1Q70E73 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAPH1Q70E73 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
RAPH1Q70E73 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPH1Q70E73 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPH1Q70E73 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
RAPH1Q70E73 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.4■■□□□ 1.18
RAPH1Q70E73 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAPH1Q70E73 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
RAPH1Q70E73 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPH1Q70E73 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPH1Q70E73 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPH1Q70E73 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.39■■□□□ 1.17
RAPH1Q70E73 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPH1Q70E73 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPH1Q70E73 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.39■■□□□ 1.17
RAPH1Q70E73 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPH1Q70E73 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPH1Q70E73 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RAPH1Q70E73 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPH1Q70E73 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.38■■□□□ 1.17
RAPH1Q70E73 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RAPH1Q70E73 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.38■■□□□ 1.17
RAPH1Q70E73 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPH1Q70E73 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
RAPH1Q70E73 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.38■■□□□ 1.17
RAPH1Q70E73 AC004448.1-201ENST00000458332 883 ntBASIC22.38■■□□□ 1.17
RAPH1Q70E73 AC012354.3-201ENST00000623734 483 ntBASIC22.38■■□□□ 1.17
RAPH1Q70E73 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPH1Q70E73 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPH1Q70E73 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RAPH1Q70E73 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPH1Q70E73 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RAPH1Q70E73 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RAPH1Q70E73 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.37■■□□□ 1.17
RAPH1Q70E73 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.37■■□□□ 1.17
RAPH1Q70E73 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.37■■□□□ 1.17
RAPH1Q70E73 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPH1Q70E73 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
RAPH1Q70E73 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.37■■□□□ 1.17
RAPH1Q70E73 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAPH1Q70E73 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RAPH1Q70E73 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.36■■□□□ 1.17
RAPH1Q70E73 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RAPH1Q70E73 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.36■■□□□ 1.17
RAPH1Q70E73 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RAPH1Q70E73 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.36■■□□□ 1.17
RAPH1Q70E73 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RAPH1Q70E73 AC079630.1-202ENST00000618127 1840 ntBASIC22.36■■□□□ 1.17
RAPH1Q70E73 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
RAPH1Q70E73 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RAPH1Q70E73 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.35■■□□□ 1.17
RAPH1Q70E73 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPH1Q70E73 AL033527.3-201ENST00000566366 1196 ntBASIC22.35■■□□□ 1.17
RAPH1Q70E73 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RAPH1Q70E73 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RAPH1Q70E73 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RAPH1Q70E73 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.35■■□□□ 1.17
RAPH1Q70E73 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.35■■□□□ 1.17
RAPH1Q70E73 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPH1Q70E73 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPH1Q70E73 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
RAPH1Q70E73 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPH1Q70E73 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAPH1Q70E73 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.34■■□□□ 1.17
RAPH1Q70E73 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAPH1Q70E73 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
RAPH1Q70E73 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAPH1Q70E73 LINC00565-201ENST00000562710 2331 ntBASIC22.34■■□□□ 1.17
RAPH1Q70E73 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.34■■□□□ 1.17
RAPH1Q70E73 MIR4508-201ENST00000584178 70 ntBASIC22.34■■□□□ 1.17
RAPH1Q70E73 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
RAPH1Q70E73 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAPH1Q70E73 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RAPH1Q70E73 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAPH1Q70E73 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAPH1Q70E73 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPH1Q70E73 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPH1Q70E73 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPH1Q70E73 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.33■■□□□ 1.17
RAPH1Q70E73 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPH1Q70E73 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.33■■□□□ 1.17
RAPH1Q70E73 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.33■■□□□ 1.17
RAPH1Q70E73 EP400NL-214ENST00000641289 2402 ntBASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms