Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.57■□□□□ 0.4
LCNL1Q6ZST4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LCNL1Q6ZST4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LCNL1Q6ZST4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 AL136162.1-201ENST00000607711 1078 ntBASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LCNL1Q6ZST4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCNL1Q6ZST4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCNL1Q6ZST4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LCNL1Q6ZST4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCNL1Q6ZST4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.55■□□□□ 0.4
LCNL1Q6ZST4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCNL1Q6ZST4 MIR638-201ENST00000385237 100 ntBASIC17.55■□□□□ 0.4
LCNL1Q6ZST4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.55■□□□□ 0.4
LCNL1Q6ZST4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 AC024257.2-201ENST00000549699 147 ntBASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCNL1Q6ZST4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 SYT6-210ENST00000641643 1587 ntBASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LCNL1Q6ZST4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 SERBP1P1-201ENST00000396021 1160 ntBASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 AC009086.3-201ENST00000623486 1008 ntBASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCNL1Q6ZST4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LCNL1Q6ZST4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LCNL1Q6ZST4 AC135279.3-201ENST00000610945 1311 ntBASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
LCNL1Q6ZST4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 DUX4L19-201ENST00000557448 1267 ntBASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 AC092171.4-201ENST00000609130 632 ntBASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.5■□□□□ 0.39
LCNL1Q6ZST4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LCNL1Q6ZST4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCNL1Q6ZST4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.49■□□□□ 0.39
LCNL1Q6ZST4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.49■□□□□ 0.39
LCNL1Q6ZST4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms