Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 pRNA.6-201ENST00000610482 90 ntBASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 pRNA.5-201ENST00000612139 90 ntBASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 pRNA.11-201ENST00000618423 90 ntBASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 pRNA.13-201ENST00000619112 90 ntBASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 BX842568.3-201ENST00000418104 571 ntBASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3CQ6NXT2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 AL139125.2-201ENST00000623134 1869 ntBASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 AC008764.7-201ENST00000593779 1081 ntBASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 AC233992.3-201ENST00000607491 485 ntBASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3CQ6NXT2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 LINC01124-201ENST00000409786 2117 ntBASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 AC099791.1-201ENST00000416440 715 ntBASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 DUX4L4-201ENST00000566884 1269 ntBASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 AL499627.2-201ENST00000606283 725 ntBASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
H3F3CQ6NXT2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3CQ6NXT2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3CQ6NXT2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 AC144652.1-201ENST00000609974 1624 ntBASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
H3F3CQ6NXT2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms