Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 SNX5-217ENST00000606557 1087 ntBASIC20.86■□□□□ 0.93
REEP3Q6NUK4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
REEP3Q6NUK4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
REEP3Q6NUK4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
REEP3Q6NUK4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.85■□□□□ 0.93
REEP3Q6NUK4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 AC103724.3-201ENST00000564481 992 ntBASIC20.85■□□□□ 0.93
REEP3Q6NUK4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
REEP3Q6NUK4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
REEP3Q6NUK4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
REEP3Q6NUK4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
REEP3Q6NUK4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.84■□□□□ 0.93
REEP3Q6NUK4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
REEP3Q6NUK4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
REEP3Q6NUK4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
REEP3Q6NUK4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
REEP3Q6NUK4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
REEP3Q6NUK4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
REEP3Q6NUK4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
REEP3Q6NUK4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
REEP3Q6NUK4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.83■□□□□ 0.93
REEP3Q6NUK4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
REEP3Q6NUK4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.83■□□□□ 0.93
REEP3Q6NUK4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.83■□□□□ 0.93
REEP3Q6NUK4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
REEP3Q6NUK4 KRT8P33-201ENST00000508125 1423 ntBASIC20.83■□□□□ 0.93
REEP3Q6NUK4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
REEP3Q6NUK4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.83■□□□□ 0.92
REEP3Q6NUK4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
REEP3Q6NUK4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
REEP3Q6NUK4 LINC00526-201ENST00000581067 1875 ntBASIC20.83■□□□□ 0.92
REEP3Q6NUK4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.83■□□□□ 0.92
REEP3Q6NUK4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
REEP3Q6NUK4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
REEP3Q6NUK4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 AC137630.3-201ENST00000607245 391 ntBASIC20.82■□□□□ 0.92
REEP3Q6NUK4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
REEP3Q6NUK4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.81■□□□□ 0.92
REEP3Q6NUK4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.8■□□□□ 0.92
REEP3Q6NUK4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
REEP3Q6NUK4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
REEP3Q6NUK4 AC144652.1-201ENST00000609974 1624 ntBASIC20.78■□□□□ 0.92
REEP3Q6NUK4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
REEP3Q6NUK4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
REEP3Q6NUK4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
REEP3Q6NUK4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms