Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 BX664725.1-201ENST00000438252 379 ntBASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 AC009299.2-201ENST00000482477 511 ntBASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 DUSP8P3-201ENST00000399571 1760 ntBASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 GUSBP5-202ENST00000510805 1989 ntBASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 AC021242.3-201ENST00000607598 1377 ntBASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATPAF1Q5TC12 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 AC127496.7-201ENST00000625110 1798 ntBASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATPAF1Q5TC12 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 AC137767.1-201ENST00000602918 1920 ntBASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATPAF1Q5TC12 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATPAF1Q5TC12 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 AL035685.1-201ENST00000636663 812 ntBASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATPAF1Q5TC12 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATPAF1Q5TC12 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATPAF1Q5TC12 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.27■□□□□ 0.67
ATPAF1Q5TC12 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 AL022069.1-201ENST00000568025 1636 ntBASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 AC092068.2-201ENST00000590491 1708 ntBASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 KRT125P-201ENST00000546827 989 ntBASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATPAF1Q5TC12 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms