Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 AC133637.1-201ENST00000624115 1537 ntBASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.28■□□□□ 0.84
RNFT1Q5M7Z0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 AL499627.2-201ENST00000606283 725 ntBASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNFT1Q5M7Z0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RNFT1Q5M7Z0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.27■□□□□ 0.83
RNFT1Q5M7Z0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNFT1Q5M7Z0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNFT1Q5M7Z0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNFT1Q5M7Z0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNFT1Q5M7Z0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.26■□□□□ 0.83
RNFT1Q5M7Z0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNFT1Q5M7Z0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNFT1Q5M7Z0 LINC01124-201ENST00000409786 2117 ntBASIC20.26■□□□□ 0.83
RNFT1Q5M7Z0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 FP325331.1-202ENST00000623531 1380 ntBASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 DUX4L4-201ENST00000566884 1269 ntBASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 AC010525.1-201ENST00000585559 441 ntBASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 TSPY26P-201ENST00000476365 1326 ntBASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNFT1Q5M7Z0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 AC104564.3-201ENST00000582367 638 ntBASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNFT1Q5M7Z0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 AL162430.1-201ENST00000480705 870 ntBASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 AC004812.2-201ENST00000611079 2094 ntBASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 AC144652.1-201ENST00000609974 1624 ntBASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 LINC00543-201ENST00000567234 1845 ntBASIC20.23■□□□□ 0.83
RNFT1Q5M7Z0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNFT1Q5M7Z0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNFT1Q5M7Z0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNFT1Q5M7Z0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNFT1Q5M7Z0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.22■□□□□ 0.83
RNFT1Q5M7Z0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RNFT1Q5M7Z0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms