Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.4■■□□□ 1.02
SPIN4Q56A73 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SPIN4Q56A73 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
SPIN4Q56A73 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SPIN4Q56A73 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SPIN4Q56A73 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
SPIN4Q56A73 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPIN4Q56A73 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.39■■□□□ 1.01
SPIN4Q56A73 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SPIN4Q56A73 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SPIN4Q56A73 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPIN4Q56A73 MIR4787-201ENST00000607364 84 ntBASIC21.39■■□□□ 1.01
SPIN4Q56A73 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPIN4Q56A73 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SPIN4Q56A73 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SPIN4Q56A73 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SPIN4Q56A73 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPIN4Q56A73 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPIN4Q56A73 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPIN4Q56A73 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.38■■□□□ 1.01
SPIN4Q56A73 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
SPIN4Q56A73 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.37■■□□□ 1.01
SPIN4Q56A73 MTDHP2-201ENST00000601468 714 ntBASIC21.37■■□□□ 1.01
SPIN4Q56A73 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPIN4Q56A73 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.37■■□□□ 1.01
SPIN4Q56A73 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPIN4Q56A73 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.37■■□□□ 1.01
SPIN4Q56A73 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SPIN4Q56A73 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.37■■□□□ 1.01
SPIN4Q56A73 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPIN4Q56A73 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPIN4Q56A73 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.36■■□□□ 1.01
SPIN4Q56A73 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SPIN4Q56A73 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 C1orf229-201ENST00000623686 2258 ntBASIC21.36■■□□□ 1.01
SPIN4Q56A73 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.36■■□□□ 1.01
SPIN4Q56A73 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 AC239859.2-201ENST00000444165 318 ntBASIC21.36■■□□□ 1.01
SPIN4Q56A73 AC009299.2-201ENST00000482477 511 ntBASIC21.36■■□□□ 1.01
SPIN4Q56A73 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPIN4Q56A73 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.36■■□□□ 1.01
SPIN4Q56A73 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SPIN4Q56A73 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SPIN4Q56A73 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SPIN4Q56A73 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.35■■□□□ 1.01
SPIN4Q56A73 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.35■■□□□ 1.01
SPIN4Q56A73 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPIN4Q56A73 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.35■■□□□ 1.01
SPIN4Q56A73 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPIN4Q56A73 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SPIN4Q56A73 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
SPIN4Q56A73 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.35■■□□□ 1.01
SPIN4Q56A73 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPIN4Q56A73 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPIN4Q56A73 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.35■■□□□ 1.01
SPIN4Q56A73 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPIN4Q56A73 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.34■■□□□ 1.01
SPIN4Q56A73 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SPIN4Q56A73 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPIN4Q56A73 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPIN4Q56A73 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.34■■□□□ 1.01
SPIN4Q56A73 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPIN4Q56A73 AC233723.2-201ENST00000623798 2106 ntBASIC21.34■■□□□ 1.01
SPIN4Q56A73 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.33■■□□□ 1.01
SPIN4Q56A73 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.33■■□□□ 1.01
SPIN4Q56A73 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.33■■□□□ 1.01
SPIN4Q56A73 AL451085.2-201ENST00000605085 799 ntBASIC21.33■■□□□ 1.01
SPIN4Q56A73 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SPIN4Q56A73 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.33■■□□□ 1
SPIN4Q56A73 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SPIN4Q56A73 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.33■■□□□ 1
SPIN4Q56A73 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SPIN4Q56A73 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPIN4Q56A73 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.32■■□□□ 1
SPIN4Q56A73 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.32■■□□□ 1
SPIN4Q56A73 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPIN4Q56A73 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.32■■□□□ 1
SPIN4Q56A73 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SPIN4Q56A73 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.32■■□□□ 1
SPIN4Q56A73 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPIN4Q56A73 AC010997.5-201ENST00000609182 354 ntBASIC21.31■■□□□ 1
SPIN4Q56A73 FP325331.1-202ENST00000623531 1380 ntBASIC21.31■■□□□ 1
SPIN4Q56A73 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SPIN4Q56A73 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPIN4Q56A73 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPIN4Q56A73 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.31■■□□□ 1
SPIN4Q56A73 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPIN4Q56A73 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.3■■□□□ 1
SPIN4Q56A73 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.3■■□□□ 1
SPIN4Q56A73 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SPIN4Q56A73 AL117328.2-201ENST00000624617 1940 ntBASIC21.3■■□□□ 1
SPIN4Q56A73 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SPIN4Q56A73 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms