Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM60Q495X7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.88■■□□□ 1.57
TRIM60Q495X7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.88■■□□□ 1.57
TRIM60Q495X7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.88■■□□□ 1.57
TRIM60Q495X7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.88■■□□□ 1.57
TRIM60Q495X7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
TRIM60Q495X7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.88■■□□□ 1.57
TRIM60Q495X7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.88■■□□□ 1.57
TRIM60Q495X7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM60Q495X7 AC016769.1-201ENST00000409132 1010 ntBASIC24.87■■□□□ 1.57
TRIM60Q495X7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM60Q495X7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM60Q495X7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.87■■□□□ 1.57
TRIM60Q495X7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM60Q495X7 AL161729.1-201ENST00000604104 1402 ntBASIC24.86■■□□□ 1.57
TRIM60Q495X7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM60Q495X7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM60Q495X7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM60Q495X7 ALDH1A3-203ENST00000557963 1670 ntBASIC24.86■■□□□ 1.57
TRIM60Q495X7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.86■■□□□ 1.57
TRIM60Q495X7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
TRIM60Q495X7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.86■■□□□ 1.57
TRIM60Q495X7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.86■■□□□ 1.57
TRIM60Q495X7 AC137761.2-201ENST00000561729 223 ntBASIC24.86■■□□□ 1.57
TRIM60Q495X7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.86■■□□□ 1.57
TRIM60Q495X7 AC145350.3-201ENST00000569033 163 ntBASIC24.86■■□□□ 1.57
TRIM60Q495X7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM60Q495X7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM60Q495X7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.85■■□□□ 1.57
TRIM60Q495X7 OR2I1P-207ENST00000453522 948 ntBASIC24.85■■□□□ 1.57
TRIM60Q495X7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.85■■□□□ 1.57
TRIM60Q495X7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM60Q495X7 AP005435.1-201ENST00000529293 1178 ntBASIC24.85■■□□□ 1.57
TRIM60Q495X7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.85■■□□□ 1.57
TRIM60Q495X7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM60Q495X7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.85■■□□□ 1.57
TRIM60Q495X7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
TRIM60Q495X7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM60Q495X7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM60Q495X7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM60Q495X7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.84■■□□□ 1.57
TRIM60Q495X7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM60Q495X7 AC104771.1-201ENST00000603335 964 ntBASIC24.84■■□□□ 1.57
TRIM60Q495X7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.84■■□□□ 1.57
TRIM60Q495X7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
TRIM60Q495X7 AC105233.4-201ENST00000642045 216 ntBASIC24.84■■□□□ 1.57
TRIM60Q495X7 ESRRAP2-201ENST00000418437 1549 ntBASIC24.84■■□□□ 1.57
TRIM60Q495X7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
TRIM60Q495X7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM60Q495X7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM60Q495X7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
TRIM60Q495X7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM60Q495X7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM60Q495X7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM60Q495X7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.83■■□□□ 1.57
TRIM60Q495X7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
TRIM60Q495X7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
TRIM60Q495X7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
TRIM60Q495X7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.83■■□□□ 1.57
TRIM60Q495X7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM60Q495X7 AL499627.2-201ENST00000606283 725 ntBASIC24.83■■□□□ 1.57
TRIM60Q495X7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM60Q495X7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
TRIM60Q495X7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TRIM60Q495X7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TRIM60Q495X7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
TRIM60Q495X7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM60Q495X7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.82■■□□□ 1.56
TRIM60Q495X7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM60Q495X7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM60Q495X7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.82■■□□□ 1.56
TRIM60Q495X7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.82■■□□□ 1.56
TRIM60Q495X7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.81■■□□□ 1.56
TRIM60Q495X7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.81■■□□□ 1.56
TRIM60Q495X7 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.81■■□□□ 1.56
TRIM60Q495X7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
TRIM60Q495X7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.81■■□□□ 1.56
TRIM60Q495X7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.81■■□□□ 1.56
TRIM60Q495X7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.81■■□□□ 1.56
TRIM60Q495X7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM60Q495X7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM60Q495X7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TRIM60Q495X7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM60Q495X7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM60Q495X7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
TRIM60Q495X7 AC026185.1-201ENST00000445748 174 ntBASIC24.8■■□□□ 1.56
TRIM60Q495X7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.8■■□□□ 1.56
TRIM60Q495X7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.8■■□□□ 1.56
TRIM60Q495X7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.8■■□□□ 1.56
TRIM60Q495X7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.8■■□□□ 1.56
TRIM60Q495X7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM60Q495X7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
TRIM60Q495X7 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.8■■□□□ 1.56
TRIM60Q495X7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM60Q495X7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
TRIM60Q495X7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM60Q495X7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM60Q495X7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.79■■□□□ 1.56
TRIM60Q495X7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.79■■□□□ 1.56
TRIM60Q495X7 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms