Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
RFX7Q2KHR2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RFX7Q2KHR2 DUX4L19-201ENST00000557448 1267 ntBASIC27.27■■□□□ 1.96
RFX7Q2KHR2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFX7Q2KHR2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
RFX7Q2KHR2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RFX7Q2KHR2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RFX7Q2KHR2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.26■■□□□ 1.95
RFX7Q2KHR2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.26■■□□□ 1.95
RFX7Q2KHR2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.26■■□□□ 1.95
RFX7Q2KHR2 RARRES2P6-201ENST00000567333 442 ntBASIC27.26■■□□□ 1.95
RFX7Q2KHR2 MIR4767-201ENST00000582827 78 ntBASIC27.26■■□□□ 1.95
RFX7Q2KHR2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.26■■□□□ 1.95
RFX7Q2KHR2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
RFX7Q2KHR2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.26■■□□□ 1.95
RFX7Q2KHR2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.26■■□□□ 1.95
RFX7Q2KHR2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.25■■□□□ 1.95
RFX7Q2KHR2 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.25■■□□□ 1.95
RFX7Q2KHR2 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.25■■□□□ 1.95
RFX7Q2KHR2 AL136967.2-201ENST00000623968 743 ntBASIC27.25■■□□□ 1.95
RFX7Q2KHR2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFX7Q2KHR2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RFX7Q2KHR2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFX7Q2KHR2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.25■■□□□ 1.95
RFX7Q2KHR2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFX7Q2KHR2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RFX7Q2KHR2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RFX7Q2KHR2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.24■■□□□ 1.95
RFX7Q2KHR2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.24■■□□□ 1.95
RFX7Q2KHR2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFX7Q2KHR2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFX7Q2KHR2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.23■■□□□ 1.95
RFX7Q2KHR2 AC099791.2-201ENST00000605725 427 ntBASIC27.23■■□□□ 1.95
RFX7Q2KHR2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC27.23■■□□□ 1.95
RFX7Q2KHR2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFX7Q2KHR2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RFX7Q2KHR2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
RFX7Q2KHR2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.23■■□□□ 1.95
RFX7Q2KHR2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFX7Q2KHR2 SYT6-210ENST00000641643 1587 ntBASIC27.23■■□□□ 1.95
RFX7Q2KHR2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
RFX7Q2KHR2 AC026271.2-201ENST00000428091 497 ntBASIC27.22■■□□□ 1.95
RFX7Q2KHR2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RFX7Q2KHR2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RFX7Q2KHR2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
RFX7Q2KHR2 AC105265.2-201ENST00000467189 838 ntBASIC27.22■■□□□ 1.95
RFX7Q2KHR2 AC011298.3-201ENST00000615796 283 ntBASIC27.22■■□□□ 1.95
RFX7Q2KHR2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 AC079630.1-202ENST00000618127 1840 ntBASIC27.21■■□□□ 1.95
RFX7Q2KHR2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 AC092171.4-201ENST00000609130 632 ntBASIC27.21■■□□□ 1.95
RFX7Q2KHR2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RFX7Q2KHR2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
RFX7Q2KHR2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
RFX7Q2KHR2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.2■■□□□ 1.95
RFX7Q2KHR2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
RFX7Q2KHR2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
RFX7Q2KHR2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.2■■□□□ 1.94
RFX7Q2KHR2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RFX7Q2KHR2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RFX7Q2KHR2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
RFX7Q2KHR2 AL138724.1-201ENST00000606771 1088 ntBASIC27.2■■□□□ 1.94
RFX7Q2KHR2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
RFX7Q2KHR2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RFX7Q2KHR2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.19■■□□□ 1.94
RFX7Q2KHR2 AC006455.2-201ENST00000429931 906 ntBASIC27.19■■□□□ 1.94
RFX7Q2KHR2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
RFX7Q2KHR2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
RFX7Q2KHR2 AC091305.1-201ENST00000479476 895 ntBASIC27.18■■□□□ 1.94
RFX7Q2KHR2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
RFX7Q2KHR2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC27.18■■□□□ 1.94
RFX7Q2KHR2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.18■■□□□ 1.94
RFX7Q2KHR2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RFX7Q2KHR2 DUSP8P3-201ENST00000399571 1760 ntBASIC27.18■■□□□ 1.94
RFX7Q2KHR2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.17■■□□□ 1.94
RFX7Q2KHR2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RFX7Q2KHR2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RFX7Q2KHR2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RFX7Q2KHR2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC27.17■■□□□ 1.94
RFX7Q2KHR2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 DUSP8P5-201ENST00000422884 1815 ntBASIC27.16■■□□□ 1.94
RFX7Q2KHR2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 AC144652.1-201ENST00000609974 1624 ntBASIC27.16■■□□□ 1.94
RFX7Q2KHR2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
RFX7Q2KHR2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RFX7Q2KHR2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms