Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 BID-214ENST00000617586 542 ntTSL 5 BASIC40.31■■■■■ 4.04
HMGXB3Q12766 AL109923.1-201ENST00000618799 583 ntBASIC40.31■■■■■ 4.04
HMGXB3Q12766 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC40.31■■■■■ 4.04
HMGXB3Q12766 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC40.3■■■■■ 4.04
HMGXB3Q12766 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC40.3■■■■■ 4.04
HMGXB3Q12766 AC006970.2-201ENST00000450065 779 ntBASIC40.3■■■■■ 4.04
HMGXB3Q12766 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC40.3■■■■■ 4.04
HMGXB3Q12766 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC40.3■■■■■ 4.04
HMGXB3Q12766 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC40.3■■■■■ 4.04
HMGXB3Q12766 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
HMGXB3Q12766 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC40.29■■■■■ 4.04
HMGXB3Q12766 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
HMGXB3Q12766 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC40.28■■■■■ 4.04
HMGXB3Q12766 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC40.28■■■■■ 4.04
HMGXB3Q12766 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
HMGXB3Q12766 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
HMGXB3Q12766 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC40.28■■■■■ 4.04
HMGXB3Q12766 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC40.28■■■■■ 4.04
HMGXB3Q12766 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC40.27■■■■■ 4.04
HMGXB3Q12766 MFF-208ENST00000409616 1247 ntTSL 5 BASIC40.27■■■■■ 4.04
HMGXB3Q12766 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC40.27■■■■■ 4.04
HMGXB3Q12766 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC40.27■■■■■ 4.04
HMGXB3Q12766 TMEM191A-211ENST00000637163 1067 ntBASIC40.26■■■■■ 4.04
HMGXB3Q12766 AC066615.1-201ENST00000640911 628 ntBASIC40.26■■■■■ 4.04
HMGXB3Q12766 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC40.26■■■■■ 4.04
HMGXB3Q12766 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC40.26■■■■■ 4.04
HMGXB3Q12766 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC40.26■■■■■ 4.04
HMGXB3Q12766 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC40.26■■■■■ 4.04
HMGXB3Q12766 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC40.26■■■■■ 4.03
HMGXB3Q12766 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC40.26■■■■■ 4.03
HMGXB3Q12766 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
HMGXB3Q12766 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC40.25■■■■■ 4.03
HMGXB3Q12766 AC105233.4-201ENST00000642045 216 ntBASIC40.25■■■■■ 4.03
HMGXB3Q12766 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
HMGXB3Q12766 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC40.24■■■■■ 4.03
HMGXB3Q12766 AP004607.4-201ENST00000530158 1459 ntBASIC40.24■■■■■ 4.03
HMGXB3Q12766 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC40.24■■■■■ 4.03
HMGXB3Q12766 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC40.24■■■■■ 4.03
HMGXB3Q12766 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
HMGXB3Q12766 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC40.24■■■■■ 4.03
HMGXB3Q12766 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
HMGXB3Q12766 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC40.23■■■■■ 4.03
HMGXB3Q12766 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
HMGXB3Q12766 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC40.23■■■■■ 4.03
HMGXB3Q12766 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC40.23■■■■■ 4.03
HMGXB3Q12766 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
HMGXB3Q12766 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC40.23■■■■■ 4.03
HMGXB3Q12766 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC40.22■■■■■ 4.03
HMGXB3Q12766 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC40.22■■■■■ 4.03
HMGXB3Q12766 AC004854.2-201ENST00000608450 1441 ntBASIC40.22■■■■■ 4.03
HMGXB3Q12766 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC40.22■■■■■ 4.03
HMGXB3Q12766 AC142086.2-201ENST00000569753 217 ntBASIC40.21■■■■■ 4.03
HMGXB3Q12766 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
HMGXB3Q12766 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC40.21■■■■■ 4.03
HMGXB3Q12766 SHD-204ENST00000599689 1729 ntTSL 5 BASIC40.21■■■■■ 4.03
HMGXB3Q12766 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC40.21■■■■■ 4.03
HMGXB3Q12766 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC40.2■■■■■ 4.03
HMGXB3Q12766 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
HMGXB3Q12766 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC40.2■■■■■ 4.03
HMGXB3Q12766 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
HMGXB3Q12766 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
HMGXB3Q12766 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC40.2■■■■■ 4.03
HMGXB3Q12766 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
HMGXB3Q12766 LSR-205ENST00000427250 1606 ntTSL 2 BASIC40.19■■■■■ 4.02
HMGXB3Q12766 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
HMGXB3Q12766 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC40.19■■■■■ 4.02
HMGXB3Q12766 ALDH1A3-203ENST00000557963 1670 ntBASIC40.19■■■■■ 4.02
HMGXB3Q12766 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
HMGXB3Q12766 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
HMGXB3Q12766 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC40.18■■■■■ 4.02
HMGXB3Q12766 GAMT-205ENST00000640762 751 ntTSL 5 BASIC40.18■■■■■ 4.02
HMGXB3Q12766 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC40.18■■■■■ 4.02
HMGXB3Q12766 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC40.18■■■■■ 4.02
HMGXB3Q12766 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC40.17■■■■■ 4.02
HMGXB3Q12766 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
HMGXB3Q12766 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC40.17■■■■■ 4.02
HMGXB3Q12766 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC40.17■■■■■ 4.02
HMGXB3Q12766 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC40.17■■■■■ 4.02
HMGXB3Q12766 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC40.17■■■■■ 4.02
HMGXB3Q12766 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
HMGXB3Q12766 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
HMGXB3Q12766 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC40.16■■■■■ 4.02
HMGXB3Q12766 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC40.16■■■■■ 4.02
HMGXB3Q12766 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
HMGXB3Q12766 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
HMGXB3Q12766 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
HMGXB3Q12766 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
HMGXB3Q12766 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
HMGXB3Q12766 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
HMGXB3Q12766 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC40.16■■■■■ 4.02
HMGXB3Q12766 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC40.15■■■■■ 4.02
HMGXB3Q12766 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC40.15■■■■■ 4.02
HMGXB3Q12766 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC40.15■■■■■ 4.02
HMGXB3Q12766 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC40.15■■■■■ 4.02
HMGXB3Q12766 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC40.15■■■■■ 4.02
HMGXB3Q12766 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
HMGXB3Q12766 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC40.14■■■■■ 4.02
HMGXB3Q12766 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC40.14■■■■■ 4.02
HMGXB3Q12766 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC40.14■■■■■ 4.02
HMGXB3Q12766 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC40.14■■■■■ 4.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms