Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SAFB-207ENST00000589863 2708 ntTSL 212.87□□□□□ -0.355e-7■■■■□ 20.7
SRSF1Q07955 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.565e-7■■■■□ 20.7
SRSF1Q07955 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.575e-7■■■■□ 20.7
SRSF1Q07955 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.615e-7■■■■□ 20.7
SRSF1Q07955 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.75e-7■■■■□ 20.7
SRSF1Q07955 HSP90B1-206ENST00000550479 698 ntTSL 24.8□□□□□ -1.642e-17■■■■□ 20.7
SRSF1Q07955 TPR-208ENST00000492973 453 ntTSL 26.08□□□□□ -1.445e-14■■■■□ 20.7
SRSF1Q07955 TTLL3-233ENST00000602338 693 nt11.91□□□□□ -0.57e-16■■■■□ 20.7
SRSF1Q07955 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.08□□□□□ -0.473e-7■■■■□ 20.7
SRSF1Q07955 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.63e-7■■■■□ 20.7
SRSF1Q07955 CDCA7-204ENST00000410101 1369 ntTSL 2 BASIC10.29□□□□□ -0.763e-7■■■■□ 20.7
SRSF1Q07955 CDCA7-208ENST00000496441 2943 ntTSL 28.66□□□□□ -1.023e-7■■■■□ 20.7
SRSF1Q07955 CDCA7-201ENST00000306721 2789 ntTSL 2 BASIC8.34□□□□□ -1.073e-7■■■■□ 20.7
SRSF1Q07955 CDCA7-206ENST00000467411 3176 ntTSL 1 (best)8.28□□□□□ -1.083e-7■■■■□ 20.7
SRSF1Q07955 CDCA7-207ENST00000468359 906 ntTSL 37.94□□□□□ -1.143e-7■■■■□ 20.7
SRSF1Q07955 ACSS2-213ENST00000480978 844 ntTSL 220.56■□□□□ 0.885e-8■■■■□ 20.7
SRSF1Q07955 ACSS2-210ENST00000476922 1527 ntTSL 217.51■□□□□ 0.395e-8■■■■□ 20.7
SRSF1Q07955 ACSS2-211ENST00000477932 2450 ntTSL 515.39■□□□□ 0.055e-8■■■■□ 20.7
SRSF1Q07955 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.93□□□□□ -0.185e-8■■■■□ 20.7
SRSF1Q07955 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.475e-8■■■■□ 20.7
SRSF1Q07955 ACSS2-214ENST00000481284 2851 ntTSL 27.72□□□□□ -1.175e-8■■■■□ 20.7
SRSF1Q07955 BTNL9-208ENST00000512570 885 ntTSL 515.23■□□□□ 0.033e-7■■■■□ 20.7
SRSF1Q07955 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.443e-7■■■■□ 20.7
SRSF1Q07955 MVD-213ENST00000566636 863 ntTSL 318.94■□□□□ 0.628e-9■■■■□ 20.6
SRSF1Q07955 MVD-216ENST00000568709 809 ntTSL 517.27■□□□□ 0.368e-9■■■■□ 20.6
SRSF1Q07955 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.31□□□□□ -0.283e-9■■■■□ 20.6
SRSF1Q07955 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.613e-9■■■■□ 20.6
SRSF1Q07955 KDELR2-205ENST00000463747 376 ntTSL 510.98□□□□□ -0.653e-9■■■■□ 20.6
SRSF1Q07955 KDELR2-202ENST00000382267 583 ntTSL 48.91□□□□□ -0.983e-9■■■■□ 20.6
SRSF1Q07955 KDELR2-204ENST00000462052 382 ntTSL 28.28□□□□□ -1.083e-9■■■■□ 20.6
SRSF1Q07955 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.82□□□□□ -1.323e-9■■■■□ 20.6
SRSF1Q07955 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.8□□□□□ -1.481e-7■■■■□ 20.6
SRSF1Q07955 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.831e-7■■■■□ 20.6
SRSF1Q07955 RIF1-202ENST00000414861 2534 ntTSL 1 (best)8.32□□□□□ -1.081e-6■■■■□ 20.6
SRSF1Q07955 RIF1-211ENST00000494333 743 ntTSL 37.63□□□□□ -1.191e-6■■■■□ 20.6
SRSF1Q07955 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.381e-6■■■■□ 20.6
SRSF1Q07955 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.411e-6■■■■□ 20.6
SRSF1Q07955 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.431e-6■■■■□ 20.6
SRSF1Q07955 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.741e-6■■■■□ 20.6
SRSF1Q07955 COA4-202ENST00000537289 582 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.831e-8■■■■□ 20.6
SRSF1Q07955 COA4-201ENST00000355693 960 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.941e-8■■■■□ 20.6
SRSF1Q07955 COA4-204ENST00000541455 1038 ntTSL 5 BASIC8.71□□□□□ -1.021e-8■■■■□ 20.6
SRSF1Q07955 COA4-206ENST00000545127 922 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.091e-8■■■■□ 20.6
SRSF1Q07955 GABRE-206ENST00000474932 430 ntTSL 53.41□□□□□ -1.865e-17■■■■□ 20.6
SRSF1Q07955 VIRMA-204ENST00000519001 460 ntTSL 35.3□□□□□ -1.561e-11■■■■□ 20.6
SRSF1Q07955 SSFA2-212ENST00000480753 2526 ntTSL 214.08□□□□□ -0.163e-8■■■■□ 20.5
SRSF1Q07955 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.243e-8■■■■□ 20.5
SRSF1Q07955 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.363e-8■■■■□ 20.5
SRSF1Q07955 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.413e-8■■■■□ 20.5
SRSF1Q07955 SSFA2-208ENST00000454579 3772 ntTSL 28.34□□□□□ -1.073e-8■■■■□ 20.5
SRSF1Q07955 SSFA2-206ENST00000440623 5420 ntTSL 25.88□□□□□ -1.473e-8■■■■□ 20.5
SRSF1Q07955 GRWD1-202ENST00000598711 881 ntTSL 315.24■□□□□ 0.032e-12■■■■□ 20.5
SRSF1Q07955 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.62e-12■■■■□ 20.5
SRSF1Q07955 MORF4L2-204ENST00000422355 562 ntTSL 28.91□□□□□ -0.985e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.125e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-209ENST00000442614 869 ntTSL 27.42□□□□□ -1.225e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-215ENST00000498064 451 ntTSL 27.42□□□□□ -1.225e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.325e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.335e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-207ENST00000434230 899 ntTSL 26.53□□□□□ -1.365e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.385e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.45e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-213ENST00000488331 326 ntTSL 25.8□□□□□ -1.485e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-211ENST00000467755 370 ntTSL 1 (best)5.77□□□□□ -1.495e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-202ENST00000418819 849 ntTSL 35.76□□□□□ -1.495e-9■■■■□ 20.5
SRSF1Q07955 MORF4L2-214ENST00000492116 582 ntTSL 25.52□□□□□ -1.535e-9■■■■□ 20.5
SRSF1Q07955 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC10.74□□□□□ -0.692e-7■■■■□ 20.5
SRSF1Q07955 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.712e-7■■■■□ 20.5
SRSF1Q07955 LAS1L-205ENST00000484069 5205 ntTSL 210.61□□□□□ -0.712e-7■■■■□ 20.5
SRSF1Q07955 LAS1L-203ENST00000374811 2439 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.812e-7■■■■□ 20.5
SRSF1Q07955 SART1-206ENST00000530251 753 ntTSL 524.82■■□□□ 1.565e-6■■■■□ 20.4
SRSF1Q07955 SART1-204ENST00000529532 1471 ntTSL 217.82■□□□□ 0.445e-6■■■■□ 20.4
SRSF1Q07955 ABHD5-201ENST00000013894 833 ntTSL 317.02■□□□□ 0.326e-7■■■■□ 20.4
SRSF1Q07955 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.116e-7■■■■□ 20.4
SRSF1Q07955 ABHD5-204ENST00000456453 876 ntTSL 413.03□□□□□ -0.326e-7■■■■□ 20.4
SRSF1Q07955 ZNF692-217ENST00000495731 461 ntTSL 325.5■■□□□ 1.672e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-228ENST00000533976 527 ntTSL 425.44■■□□□ 1.662e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-225ENST00000533614 553 ntTSL 421.26■□□□□ 0.992e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-224ENST00000530986 595 ntTSL 420.09■□□□□ 0.812e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-229ENST00000534456 587 ntTSL 418.26■□□□□ 0.512e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-218ENST00000496053 694 ntTSL 317.3■□□□□ 0.362e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-215ENST00000483791 681 ntTSL 317.14■□□□□ 0.332e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-221ENST00000497847 1031 ntTSL 217.14■□□□□ 0.332e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-223ENST00000530699 896 ntTSL 1 (best)15.32■□□□□ 0.042e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-222ENST00000528141 576 ntTSL 415.27■□□□□ 0.042e-8■■■■□ 20.4
SRSF1Q07955 ZNF692-230ENST00000534660 552 ntTSL 312.42□□□□□ -0.422e-8■■■■□ 20.4
SRSF1Q07955 NT5C3B-212ENST00000495317 836 ntTSL 522.43■■□□□ 1.189e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-204ENST00000445655 922 ntTSL 220.27■□□□□ 0.849e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-208ENST00000475053 675 ntTSL 320.27■□□□□ 0.849e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-216ENST00000523903 1534 ntTSL 1 (best)20.19■□□□□ 0.829e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-209ENST00000476921 1081 ntTSL 319.98■□□□□ 0.799e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-201ENST00000393910 1253 ntTSL 219.98■□□□□ 0.799e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-205ENST00000460893 964 ntTSL 319.32■□□□□ 0.689e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.669e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-207ENST00000470690 1729 ntTSL 518.9■□□□□ 0.629e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-206ENST00000469698 1573 ntTSL 317.57■□□□□ 0.49e-7■■■■□ 20.4
SRSF1Q07955 ATIC-204ENST00000427397 1046 ntTSL 517.54■□□□□ 0.49e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-202ENST00000415460 730 ntTSL 517.3■□□□□ 0.369e-7■■■■□ 20.4
SRSF1Q07955 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.92■□□□□ 0.39e-7■■■■□ 20.4
SRSF1Q07955 ATIC-207ENST00000443953 2187 ntTSL 216.24■□□□□ 0.199e-7■■■■□ 20.4
Retrieved 100 of 14,836 protein–RNA pairs in 101.9 ms