RNA–Protein interactions for RNA: ENST00000468359.1

CDCA7-207, Transcript of cell division cycle associated 7, humanhuman

TSL 3

Gene CDCA7, Length 906 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-207ENST00000468359 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
CDCA7-207ENST00000468359 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
CDCA7-207ENST00000468359 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
CDCA7-207ENST00000468359 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
CDCA7-207ENST00000468359 FOXD1Q16676 465 aa22.76■■□□□ 1.23
CDCA7-207ENST00000468359 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
CDCA7-207ENST00000468359 MSH5O43196 834 aa21.4■■□□□ 1.02
CDCA7-207ENST00000468359 PIAS4Q8N2W9 510 aaPredicted RBP21.37■■□□□ 1.01
CDCA7-207ENST00000468359 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
CDCA7-207ENST00000468359 ADRA2BP18089 450 aa21.28■■□□□ 1
CDCA7-207ENST00000468359 POTEDQ86YR6 584 aa20.54■□□□□ 0.88
CDCA7-207ENST00000468359 NISCHQ9Y2I1 1504 aa20.35■□□□□ 0.85
CDCA7-207ENST00000468359 SCAF1Q9H7N4 1312 aaKnown RBP19.69■□□□□ 0.74
CDCA7-207ENST00000468359 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
CDCA7-207ENST00000468359 DMRT2Q9Y5R5 561 aa19.46■□□□□ 0.71
CDCA7-207ENST00000468359 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
CDCA7-207ENST00000468359 CNKSR2Q8WXI2 1034 aa18.92■□□□□ 0.62
CDCA7-207ENST00000468359 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
CDCA7-207ENST00000468359 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
CDCA7-207ENST00000468359 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
CDCA7-207ENST00000468359 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
CDCA7-207ENST00000468359 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.51
CDCA7-207ENST00000468359 NPM3O75607 178 aaKnown RBP18.26■□□□□ 0.51
CDCA7-207ENST00000468359 CACNB1Q02641 598 aaPredicted RBP18.24■□□□□ 0.51
CDCA7-207ENST00000468359 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
CDCA7-207ENST00000468359 RNF39Q9H2S5 420 aa18.19■□□□□ 0.5
CDCA7-207ENST00000468359 ABCC9O60706 1549 aa18.18■□□□□ 0.5
CDCA7-207ENST00000468359 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
CDCA7-207ENST00000468359 KCNA4P22459 653 aa17.99■□□□□ 0.47
CDCA7-207ENST00000468359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.462e-7■■■■□ 22
CDCA7-207ENST00000468359 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
CDCA7-207ENST00000468359 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
CDCA7-207ENST00000468359 SLC4A2P04920 1241 aa17.36■□□□□ 0.37
CDCA7-207ENST00000468359 NACADO15069 1562 aa17.28■□□□□ 0.36
CDCA7-207ENST00000468359 APLP2Q06481 763 aa17.25■□□□□ 0.35
CDCA7-207ENST00000468359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
CDCA7-207ENST00000468359 CAPN15O75808 1086 aa17.23■□□□□ 0.35
CDCA7-207ENST00000468359 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
CDCA7-207ENST00000468359 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
CDCA7-207ENST00000468359 MYO15BQ96JP2 1530 aa17.1■□□□□ 0.33
CDCA7-207ENST00000468359 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
CDCA7-207ENST00000468359 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
CDCA7-207ENST00000468359 DSG3P32926 999 aa17.06■□□□□ 0.32
CDCA7-207ENST00000468359 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
CDCA7-207ENST00000468359 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
CDCA7-207ENST00000468359 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
CDCA7-207ENST00000468359 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.31
CDCA7-207ENST00000468359 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
CDCA7-207ENST00000468359 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
CDCA7-207ENST00000468359 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
CDCA7-207ENST00000468359 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
CDCA7-207ENST00000468359 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
CDCA7-207ENST00000468359 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
CDCA7-207ENST00000468359 ABCB7O75027 752 aa16.78■□□□□ 0.28
CDCA7-207ENST00000468359 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
CDCA7-207ENST00000468359 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
CDCA7-207ENST00000468359 POLA2Q14181 598 aa16.53■□□□□ 0.24
CDCA7-207ENST00000468359 ZBTB22O15209 634 aa16.48■□□□□ 0.23
CDCA7-207ENST00000468359 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.23
CDCA7-207ENST00000468359 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
CDCA7-207ENST00000468359 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
CDCA7-207ENST00000468359 CECR2Q9BXF3 1484 aa16.41■□□□□ 0.22
CDCA7-207ENST00000468359 ATF5Q9Y2D1 282 aaPredicted RBP16.4■□□□□ 0.22
CDCA7-207ENST00000468359 ATXN8OSP0DMR3 200 aa16.37■□□□□ 0.21
CDCA7-207ENST00000468359 ZBTB12Q9Y330 459 aaPredicted RBP16.36■□□□□ 0.21
CDCA7-207ENST00000468359 POTEHQ6S545 545 aa16.16■□□□□ 0.18
CDCA7-207ENST00000468359 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
CDCA7-207ENST00000468359 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
CDCA7-207ENST00000468359 FBLN2P98095 1184 aa15.97■□□□□ 0.15
CDCA7-207ENST00000468359 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
CDCA7-207ENST00000468359 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
CDCA7-207ENST00000468359 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
CDCA7-207ENST00000468359 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
CDCA7-207ENST00000468359 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
CDCA7-207ENST00000468359 SMARCA2P51531 1590 aa15.83■□□□□ 0.13
CDCA7-207ENST00000468359 HMGXB3Q12766 1538 aa15.83■□□□□ 0.12
CDCA7-207ENST00000468359 REM2Q8IYK8 340 aaPredicted RBP15.8■□□□□ 0.12
CDCA7-207ENST00000468359 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
CDCA7-207ENST00000468359 SPDYE2BA6NHP3 402 aa15.79■□□□□ 0.12
CDCA7-207ENST00000468359 SPDYE6P0CI01 402 aa15.79■□□□□ 0.12
CDCA7-207ENST00000468359 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
CDCA7-207ENST00000468359 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
CDCA7-207ENST00000468359 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
CDCA7-207ENST00000468359 CUX2O14529 1486 aa15.74■□□□□ 0.11
CDCA7-207ENST00000468359 DNAJC5Q9H3Z4 198 aa15.72■□□□□ 0.11
CDCA7-207ENST00000468359 BAZ1BQ9UIG0 1483 aaKnown RBP15.7■□□□□ 0.1
CDCA7-207ENST00000468359 MKRN4PQ13434 485 aaPredicted RBP15.69■□□□□ 0.1
CDCA7-207ENST00000468359 ERCC6Q03468 1493 aa15.69■□□□□ 0.1
CDCA7-207ENST00000468359 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
CDCA7-207ENST00000468359 NESP48681 1621 aa15.64■□□□□ 0.09
CDCA7-207ENST00000468359 PITPNM1O00562 1244 aa15.61■□□□□ 0.09
CDCA7-207ENST00000468359 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
CDCA7-207ENST00000468359 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.08
CDCA7-207ENST00000468359 SSUH2Q9Y2M2 353 aa15.54■□□□□ 0.08
CDCA7-207ENST00000468359 PIP4P2Q8N4L2 257 aa15.52■□□□□ 0.08
CDCA7-207ENST00000468359 THOC2Q8NI27 1593 aaKnown RBP15.51■□□□□ 0.07
CDCA7-207ENST00000468359 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
CDCA7-207ENST00000468359 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
CDCA7-207ENST00000468359 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.07
CDCA7-207ENST00000468359 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms