RNA–Protein interactions for RNA: ENST00000454579.5

SSFA2-208, Transcript of Sperm-specific antigen 2, humanhuman

TSL 2

Gene SSFA2, Length 3,772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-208ENST00000454579 NISCHQ9Y2I1 1504 aa21.02■□□□□ 0.96
SSFA2-208ENST00000454579 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
SSFA2-208ENST00000454579 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
SSFA2-208ENST00000454579 HRCP23327 699 aa17.91■□□□□ 0.46
SSFA2-208ENST00000454579 DCAF8L2P0C7V8 631 aa17.87■□□□□ 0.45
SSFA2-208ENST00000454579 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
SSFA2-208ENST00000454579 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
SSFA2-208ENST00000454579 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
SSFA2-208ENST00000454579 MYO15BQ96JP2 1530 aa17.76■□□□□ 0.43
SSFA2-208ENST00000454579 PPARGC1BQ86YN6 1023 aaKnown RBP17.58■□□□□ 0.4
SSFA2-208ENST00000454579 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
SSFA2-208ENST00000454579 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
SSFA2-208ENST00000454579 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
SSFA2-208ENST00000454579 TRIM26Q12899 539 aaPredicted RBP17.29■□□□□ 0.36
SSFA2-208ENST00000454579 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
SSFA2-208ENST00000454579 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
SSFA2-208ENST00000454579 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
SSFA2-208ENST00000454579 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
SSFA2-208ENST00000454579 ABCC9O60706 1549 aa16.84■□□□□ 0.29
SSFA2-208ENST00000454579 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
SSFA2-208ENST00000454579 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
SSFA2-208ENST00000454579 SCRIBQ14160 1630 aa16.76■□□□□ 0.27
SSFA2-208ENST00000454579 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
SSFA2-208ENST00000454579 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
SSFA2-208ENST00000454579 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.25
SSFA2-208ENST00000454579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
SSFA2-208ENST00000454579 TTBK1Q5TCY1 1321 aaPredicted RBP16.52■□□□□ 0.24
SSFA2-208ENST00000454579 ACIN1Q9UKV3 1341 aaKnown RBP16.48■□□□□ 0.23
SSFA2-208ENST00000454579 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
SSFA2-208ENST00000454579 NEUROD1Q13562 356 aa16.44■□□□□ 0.22
SSFA2-208ENST00000454579 DIEXFQ68CQ4 756 aaKnown RBP16.44■□□□□ 0.22
SSFA2-208ENST00000454579 CENPBP07199 599 aaPredicted RBP16.43■□□□□ 0.22
SSFA2-208ENST00000454579 MROH2BQ7Z745 1585 aa16.4■□□□□ 0.22
SSFA2-208ENST00000454579 GTF3C3Q9Y5Q9 886 aa16.37■□□□□ 0.21
SSFA2-208ENST00000454579 WIZO95785 1651 aa16.33■□□□□ 0.2
SSFA2-208ENST00000454579 NACADO15069 1562 aa16.26■□□□□ 0.19
SSFA2-208ENST00000454579 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
SSFA2-208ENST00000454579 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
SSFA2-208ENST00000454579 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
SSFA2-208ENST00000454579 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
SSFA2-208ENST00000454579 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
SSFA2-208ENST00000454579 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
SSFA2-208ENST00000454579 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
SSFA2-208ENST00000454579 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
SSFA2-208ENST00000454579 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
SSFA2-208ENST00000454579 SOGA1O94964 1423 aa16.11■□□□□ 0.17
SSFA2-208ENST00000454579 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
SSFA2-208ENST00000454579 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
SSFA2-208ENST00000454579 MYT1Q01538 1121 aa16.08■□□□□ 0.17
SSFA2-208ENST00000454579 EIF4G1Q04637 1599 aaKnown RBP16.05■□□□□ 0.16
SSFA2-208ENST00000454579 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
SSFA2-208ENST00000454579 MIER1Q8N108 512 aa16.01■□□□□ 0.15
SSFA2-208ENST00000454579 APLP2Q06481 763 aa16.01■□□□□ 0.15
SSFA2-208ENST00000454579 EEA1Q15075 1411 aa16■□□□□ 0.15
SSFA2-208ENST00000454579 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
SSFA2-208ENST00000454579 RANGAP1P46060 587 aaPredicted RBP15.97■□□□□ 0.15
SSFA2-208ENST00000454579 GOLGA3Q08378 1498 aa15.96■□□□□ 0.14
SSFA2-208ENST00000454579 SMARCA2P51531 1590 aa15.95■□□□□ 0.14
SSFA2-208ENST00000454579 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
SSFA2-208ENST00000454579 CLIP1P30622 1438 aa15.85■□□□□ 0.13
SSFA2-208ENST00000454579 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
SSFA2-208ENST00000454579 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
SSFA2-208ENST00000454579 VPS8Q8N3P4 1428 aa15.76■□□□□ 0.11
SSFA2-208ENST00000454579 KIF21BO75037 1637 aa15.68■□□□□ 0.1
SSFA2-208ENST00000454579 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
SSFA2-208ENST00000454579 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
SSFA2-208ENST00000454579 UNC13AQ9UPW8 1703 aa15.64■□□□□ 0.09
SSFA2-208ENST00000454579 CLSPNQ9HAW4 1339 aa15.63■□□□□ 0.09
SSFA2-208ENST00000454579 BAZ1BQ9UIG0 1483 aaKnown RBP15.63■□□□□ 0.09
SSFA2-208ENST00000454579 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
SSFA2-208ENST00000454579 ITGAEP38570 1179 aa15.61■□□□□ 0.09
SSFA2-208ENST00000454579 DHX57Q6P158 1386 aaKnown RBP15.6■□□□□ 0.09
SSFA2-208ENST00000454579 KANK4Q5T7N3 995 aaPredicted RBP15.57■□□□□ 0.08
SSFA2-208ENST00000454579 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
SSFA2-208ENST00000454579 PEG3Q9GZU2 1588 aa15.48■□□□□ 0.07
SSFA2-208ENST00000454579 BCANQ96GW7 911 aa15.45■□□□□ 0.06
SSFA2-208ENST00000454579 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
SSFA2-208ENST00000454579 TSHZ2Q9NRE2 1034 aa15.44■□□□□ 0.06
SSFA2-208ENST00000454579 ARAP1Q96P48 1450 aa15.43■□□□□ 0.06
SSFA2-208ENST00000454579 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
SSFA2-208ENST00000454579 KCNH8Q96L42 1107 aa15.43■□□□□ 0.06
SSFA2-208ENST00000454579 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
SSFA2-208ENST00000454579 PRXQ9BXM0 1461 aa15.39■□□□□ 0.05
SSFA2-208ENST00000454579 RRBP1Q9P2E9 1410 aaKnown RBP15.39■□□□□ 0.05
SSFA2-208ENST00000454579 DDX10Q13206 875 aaKnown RBP15.38■□□□□ 0.05
SSFA2-208ENST00000454579 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
SSFA2-208ENST00000454579 FKBP8Q14318 412 aa15.37■□□□□ 0.05
SSFA2-208ENST00000454579 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
SSFA2-208ENST00000454579 NEFLP07196 543 aa15.35■□□□□ 0.05
SSFA2-208ENST00000454579 RAB3GAP2Q9H2M9 1393 aa15.35■□□□□ 0.05
SSFA2-208ENST00000454579 FAM50AQ14320 339 aaKnown RBP15.34■□□□□ 0.05
SSFA2-208ENST00000454579 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
SSFA2-208ENST00000454579 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
SSFA2-208ENST00000454579 SIN3AQ96ST3 1273 aa15.31■□□□□ 0.04
SSFA2-208ENST00000454579 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
SSFA2-208ENST00000454579 BIVM-ERCC5R4GMW8 1640 aa15.28■□□□□ 0.04
SSFA2-208ENST00000454579 CUX2O14529 1486 aa15.27■□□□□ 0.04
SSFA2-208ENST00000454579 ARHGAP35Q9NRY4 1499 aa15.27■□□□□ 0.04
SSFA2-208ENST00000454579 TRIM52Q96A61 297 aa15.26■□□□□ 0.03
SSFA2-208ENST00000454579 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms