Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL10A1Q03692 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL10A1Q03692 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.84■□□□□ 0.61
COL10A1Q03692 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.84■□□□□ 0.61
COL10A1Q03692 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.84■□□□□ 0.61
COL10A1Q03692 AC079630.1-202ENST00000618127 1840 ntBASIC18.84■□□□□ 0.61
COL10A1Q03692 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL10A1Q03692 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL10A1Q03692 UNC93B8-201ENST00000511903 705 ntBASIC18.84■□□□□ 0.61
COL10A1Q03692 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL10A1Q03692 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL10A1Q03692 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL10A1Q03692 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL10A1Q03692 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
COL10A1Q03692 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL10A1Q03692 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.83■□□□□ 0.61
COL10A1Q03692 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL10A1Q03692 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL10A1Q03692 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.83■□□□□ 0.6
COL10A1Q03692 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.82■□□□□ 0.6
COL10A1Q03692 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL10A1Q03692 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.82■□□□□ 0.6
COL10A1Q03692 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.82■□□□□ 0.6
COL10A1Q03692 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.82■□□□□ 0.6
COL10A1Q03692 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.82■□□□□ 0.6
COL10A1Q03692 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.82■□□□□ 0.6
COL10A1Q03692 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL10A1Q03692 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL10A1Q03692 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.81■□□□□ 0.6
COL10A1Q03692 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.81■□□□□ 0.6
COL10A1Q03692 DUSP8P3-201ENST00000399571 1760 ntBASIC18.81■□□□□ 0.6
COL10A1Q03692 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COL10A1Q03692 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL10A1Q03692 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.81■□□□□ 0.6
COL10A1Q03692 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.81■□□□□ 0.6
COL10A1Q03692 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.81■□□□□ 0.6
COL10A1Q03692 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.81■□□□□ 0.6
COL10A1Q03692 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL10A1Q03692 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL10A1Q03692 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL10A1Q03692 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
COL10A1Q03692 GUSBP5-201ENST00000418136 578 ntBASIC18.8■□□□□ 0.6
COL10A1Q03692 KRT16P3-201ENST00000439127 1283 ntBASIC18.8■□□□□ 0.6
COL10A1Q03692 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COL10A1Q03692 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL10A1Q03692 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL10A1Q03692 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL10A1Q03692 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL10A1Q03692 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COL10A1Q03692 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL10A1Q03692 C9orf163-202ENST00000624034 2573 ntBASIC18.8■□□□□ 0.6
COL10A1Q03692 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COL10A1Q03692 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL10A1Q03692 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
COL10A1Q03692 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.79■□□□□ 0.6
COL10A1Q03692 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL10A1Q03692 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.79■□□□□ 0.6
COL10A1Q03692 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL10A1Q03692 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL10A1Q03692 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.79■□□□□ 0.6
COL10A1Q03692 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL10A1Q03692 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL10A1Q03692 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.78■□□□□ 0.6
COL10A1Q03692 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL10A1Q03692 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
COL10A1Q03692 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COL10A1Q03692 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.78■□□□□ 0.6
COL10A1Q03692 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL10A1Q03692 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.78■□□□□ 0.6
COL10A1Q03692 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL10A1Q03692 MIR6724-1-201ENST00000616420 92 ntBASIC18.78■□□□□ 0.6
COL10A1Q03692 MIR6724-2-201ENST00000616483 92 ntBASIC18.78■□□□□ 0.6
COL10A1Q03692 MIR6724-4-201ENST00000617390 92 ntBASIC18.78■□□□□ 0.6
COL10A1Q03692 MIR6724-3-201ENST00000622482 92 ntBASIC18.78■□□□□ 0.6
COL10A1Q03692 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL10A1Q03692 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
COL10A1Q03692 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.78■□□□□ 0.6
COL10A1Q03692 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL10A1Q03692 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COL10A1Q03692 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.77■□□□□ 0.6
COL10A1Q03692 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
COL10A1Q03692 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL10A1Q03692 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.77■□□□□ 0.6
COL10A1Q03692 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL10A1Q03692 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
COL10A1Q03692 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
COL10A1Q03692 AC019069.1-201ENST00000610008 1333 ntBASIC18.76■□□□□ 0.59
COL10A1Q03692 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COL10A1Q03692 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL10A1Q03692 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms