Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFHR3Q02985 MIR638-201ENST00000385237 100 ntBASIC17.52■□□□□ 0.4
CFHR3Q02985 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CFHR3Q02985 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.52■□□□□ 0.4
CFHR3Q02985 DUX4L4-201ENST00000566884 1269 ntBASIC17.52■□□□□ 0.4
CFHR3Q02985 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.52■□□□□ 0.4
CFHR3Q02985 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFHR3Q02985 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFHR3Q02985 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.39
CFHR3Q02985 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.52■□□□□ 0.39
CFHR3Q02985 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.52■□□□□ 0.39
CFHR3Q02985 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CFHR3Q02985 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CFHR3Q02985 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFHR3Q02985 AC079630.1-202ENST00000618127 1840 ntBASIC17.51■□□□□ 0.39
CFHR3Q02985 AC135279.3-201ENST00000610945 1311 ntBASIC17.51■□□□□ 0.39
CFHR3Q02985 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CFHR3Q02985 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.51■□□□□ 0.39
CFHR3Q02985 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CFHR3Q02985 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFHR3Q02985 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.51■□□□□ 0.39
CFHR3Q02985 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFHR3Q02985 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CFHR3Q02985 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFHR3Q02985 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFHR3Q02985 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.51■□□□□ 0.39
CFHR3Q02985 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFHR3Q02985 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CFHR3Q02985 AC133561.4-201ENST00000566112 224 ntBASIC17.51■□□□□ 0.39
CFHR3Q02985 AC011298.3-201ENST00000615796 283 ntBASIC17.51■□□□□ 0.39
CFHR3Q02985 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.51■□□□□ 0.39
CFHR3Q02985 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFHR3Q02985 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFHR3Q02985 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CFHR3Q02985 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFHR3Q02985 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CFHR3Q02985 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.5■□□□□ 0.39
CFHR3Q02985 AC024257.2-201ENST00000549699 147 ntBASIC17.5■□□□□ 0.39
CFHR3Q02985 MIR3181-201ENST00000578512 73 ntBASIC17.5■□□□□ 0.39
CFHR3Q02985 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFHR3Q02985 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.5■□□□□ 0.39
CFHR3Q02985 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CFHR3Q02985 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFHR3Q02985 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFHR3Q02985 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFHR3Q02985 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CFHR3Q02985 LINC01529-204ENST00000636474 1715 ntBASIC17.5■□□□□ 0.39
CFHR3Q02985 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFHR3Q02985 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFHR3Q02985 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFHR3Q02985 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFHR3Q02985 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.49■□□□□ 0.39
CFHR3Q02985 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CFHR3Q02985 PBX2P1-201ENST00000493219 1291 ntBASIC17.49■□□□□ 0.39
CFHR3Q02985 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.49■□□□□ 0.39
CFHR3Q02985 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.49■□□□□ 0.39
CFHR3Q02985 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.49■□□□□ 0.39
CFHR3Q02985 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.49■□□□□ 0.39
CFHR3Q02985 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CFHR3Q02985 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFHR3Q02985 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CFHR3Q02985 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.49■□□□□ 0.39
CFHR3Q02985 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CFHR3Q02985 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.48■□□□□ 0.39
CFHR3Q02985 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.48■□□□□ 0.39
CFHR3Q02985 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.48■□□□□ 0.39
CFHR3Q02985 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 AL499627.2-201ENST00000606283 725 ntBASIC17.48■□□□□ 0.39
CFHR3Q02985 pRNA.6-201ENST00000610482 90 ntBASIC17.48■□□□□ 0.39
CFHR3Q02985 pRNA.5-201ENST00000612139 90 ntBASIC17.48■□□□□ 0.39
CFHR3Q02985 pRNA.11-201ENST00000618423 90 ntBASIC17.48■□□□□ 0.39
CFHR3Q02985 pRNA.13-201ENST00000619112 90 ntBASIC17.48■□□□□ 0.39
CFHR3Q02985 AC136469.2-201ENST00000623944 1028 ntBASIC17.48■□□□□ 0.39
CFHR3Q02985 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CFHR3Q02985 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.48■□□□□ 0.39
CFHR3Q02985 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFHR3Q02985 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.47■□□□□ 0.39
CFHR3Q02985 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFHR3Q02985 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CFHR3Q02985 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
CFHR3Q02985 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.47■□□□□ 0.39
CFHR3Q02985 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CFHR3Q02985 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFHR3Q02985 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.47■□□□□ 0.39
CFHR3Q02985 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CFHR3Q02985 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CFHR3Q02985 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFHR3Q02985 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFHR3Q02985 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CFHR3Q02985 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFHR3Q02985 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CFHR3Q02985 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms