Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CX3CL1P78423 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CX3CL1P78423 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CX3CL1P78423 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.97■□□□□ 0.47
CX3CL1P78423 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CX3CL1P78423 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.97■□□□□ 0.47
CX3CL1P78423 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.97■□□□□ 0.47
CX3CL1P78423 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CX3CL1P78423 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CX3CL1P78423 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.96■□□□□ 0.47
CX3CL1P78423 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.96■□□□□ 0.47
CX3CL1P78423 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.96■□□□□ 0.47
CX3CL1P78423 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CX3CL1P78423 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CX3CL1P78423 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CX3CL1P78423 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CX3CL1P78423 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CX3CL1P78423 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.95■□□□□ 0.46
CX3CL1P78423 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.95■□□□□ 0.46
CX3CL1P78423 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.95■□□□□ 0.46
CX3CL1P78423 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.95■□□□□ 0.46
CX3CL1P78423 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.95■□□□□ 0.46
CX3CL1P78423 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.95■□□□□ 0.46
CX3CL1P78423 KRT16P3-201ENST00000439127 1283 ntBASIC17.95■□□□□ 0.46
CX3CL1P78423 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CX3CL1P78423 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CX3CL1P78423 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CX3CL1P78423 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.95■□□□□ 0.46
CX3CL1P78423 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CL1P78423 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CX3CL1P78423 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CL1P78423 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CL1P78423 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CX3CL1P78423 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CX3CL1P78423 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CX3CL1P78423 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.94■□□□□ 0.46
CX3CL1P78423 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CL1P78423 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CX3CL1P78423 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.94■□□□□ 0.46
CX3CL1P78423 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.94■□□□□ 0.46
CX3CL1P78423 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CL1P78423 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CX3CL1P78423 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CL1P78423 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CL1P78423 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CX3CL1P78423 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.93■□□□□ 0.46
CX3CL1P78423 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.93■□□□□ 0.46
CX3CL1P78423 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CX3CL1P78423 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.93■□□□□ 0.46
CX3CL1P78423 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.93■□□□□ 0.46
CX3CL1P78423 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CL1P78423 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CX3CL1P78423 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CX3CL1P78423 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CX3CL1P78423 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CX3CL1P78423 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CX3CL1P78423 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CX3CL1P78423 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CX3CL1P78423 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CX3CL1P78423 MIR6724-1-201ENST00000616420 92 ntBASIC17.92■□□□□ 0.46
CX3CL1P78423 MIR6724-2-201ENST00000616483 92 ntBASIC17.92■□□□□ 0.46
CX3CL1P78423 MIR6724-4-201ENST00000617390 92 ntBASIC17.92■□□□□ 0.46
CX3CL1P78423 MIR6724-3-201ENST00000622482 92 ntBASIC17.92■□□□□ 0.46
CX3CL1P78423 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CX3CL1P78423 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CX3CL1P78423 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CL1P78423 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CL1P78423 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CX3CL1P78423 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.91■□□□□ 0.46
CX3CL1P78423 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CL1P78423 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CL1P78423 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CL1P78423 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CX3CL1P78423 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms