Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.45■□□□□ 0.7
SEC61A1P61619 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
SEC61A1P61619 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A1P61619 HLA-L-211ENST00000482052 1765 ntBASIC19.44■□□□□ 0.7
SEC61A1P61619 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A1P61619 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.44■□□□□ 0.7
SEC61A1P61619 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A1P61619 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A1P61619 TSPY9P-201ENST00000440215 945 ntBASIC19.44■□□□□ 0.7
SEC61A1P61619 TSPY11P-201ENST00000442607 1045 ntBASIC19.44■□□□□ 0.7
SEC61A1P61619 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.44■□□□□ 0.7
SEC61A1P61619 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A1P61619 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A1P61619 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A1P61619 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A1P61619 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.43■□□□□ 0.7
SEC61A1P61619 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A1P61619 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.43■□□□□ 0.7
SEC61A1P61619 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A1P61619 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.43■□□□□ 0.7
SEC61A1P61619 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SEC61A1P61619 AF131216.4-201ENST00000638924 1588 ntBASIC19.43■□□□□ 0.7
SEC61A1P61619 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A1P61619 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.43■□□□□ 0.7
SEC61A1P61619 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.42■□□□□ 0.7
SEC61A1P61619 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A1P61619 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A1P61619 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A1P61619 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SEC61A1P61619 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SEC61A1P61619 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.42■□□□□ 0.7
SEC61A1P61619 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A1P61619 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A1P61619 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A1P61619 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SEC61A1P61619 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A1P61619 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A1P61619 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.41■□□□□ 0.7
SEC61A1P61619 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.41■□□□□ 0.7
SEC61A1P61619 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.41■□□□□ 0.7
SEC61A1P61619 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A1P61619 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A1P61619 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SEC61A1P61619 AC127496.7-201ENST00000625110 1798 ntBASIC19.41■□□□□ 0.7
SEC61A1P61619 LINC00526-201ENST00000581067 1875 ntBASIC19.41■□□□□ 0.7
SEC61A1P61619 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SEC61A1P61619 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A1P61619 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.41■□□□□ 0.7
SEC61A1P61619 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A1P61619 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A1P61619 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.4■□□□□ 0.7
SEC61A1P61619 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A1P61619 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SEC61A1P61619 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.4■□□□□ 0.7
SEC61A1P61619 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A1P61619 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A1P61619 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A1P61619 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A1P61619 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A1P61619 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.4■□□□□ 0.7
SEC61A1P61619 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.39■□□□□ 0.7
SEC61A1P61619 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SEC61A1P61619 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A1P61619 AC007375.3-201ENST00000600936 2314 ntBASIC19.39■□□□□ 0.69
SEC61A1P61619 SLC25A24-204ENST00000569674 2357 ntBASIC19.39■□□□□ 0.69
SEC61A1P61619 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A1P61619 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.39■□□□□ 0.69
SEC61A1P61619 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.39■□□□□ 0.69
SEC61A1P61619 AC092028.1-203ENST00000608262 953 ntBASIC19.39■□□□□ 0.69
SEC61A1P61619 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.39■□□□□ 0.69
SEC61A1P61619 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SEC61A1P61619 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SEC61A1P61619 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.39■□□□□ 0.69
SEC61A1P61619 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A1P61619 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A1P61619 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A1P61619 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A1P61619 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SEC61A1P61619 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A1P61619 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.38■□□□□ 0.69
SEC61A1P61619 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SEC61A1P61619 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SEC61A1P61619 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A1P61619 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A1P61619 KRT16P3-201ENST00000439127 1283 ntBASIC19.38■□□□□ 0.69
SEC61A1P61619 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.38■□□□□ 0.69
SEC61A1P61619 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.38■□□□□ 0.69
SEC61A1P61619 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.38■□□□□ 0.69
SEC61A1P61619 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.38■□□□□ 0.69
SEC61A1P61619 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.38■□□□□ 0.69
SEC61A1P61619 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A1P61619 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.37■□□□□ 0.69
SEC61A1P61619 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SEC61A1P61619 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A1P61619 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A1P61619 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SEC61A1P61619 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A1P61619 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.37■□□□□ 0.69
SEC61A1P61619 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A1P61619 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms