Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN17P56750 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN17P56750 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN17P56750 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN17P56750 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN17P56750 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN17P56750 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN17P56750 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN17P56750 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN17P56750 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLDN17P56750 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN17P56750 AC144652.1-201ENST00000609974 1624 ntBASIC19.95■□□□□ 0.78
CLDN17P56750 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLDN17P56750 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.95■□□□□ 0.78
CLDN17P56750 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.95■□□□□ 0.78
CLDN17P56750 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLDN17P56750 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN17P56750 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLDN17P56750 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLDN17P56750 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN17P56750 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN17P56750 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN17P56750 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN17P56750 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN17P56750 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN17P56750 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN17P56750 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN17P56750 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN17P56750 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN17P56750 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CLDN17P56750 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN17P56750 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.93■□□□□ 0.78
CLDN17P56750 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN17P56750 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN17P56750 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN17P56750 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN17P56750 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN17P56750 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN17P56750 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN17P56750 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN17P56750 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.92■□□□□ 0.78
CLDN17P56750 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CLDN17P56750 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN17P56750 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN17P56750 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN17P56750 AL353803.4-201ENST00000565882 1934 ntBASIC19.92■□□□□ 0.78
CLDN17P56750 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN17P56750 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN17P56750 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CLDN17P56750 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN17P56750 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN17P56750 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN17P56750 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN17P56750 DUSP8P3-201ENST00000399571 1760 ntBASIC19.91■□□□□ 0.78
CLDN17P56750 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN17P56750 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLDN17P56750 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN17P56750 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN17P56750 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN17P56750 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN17P56750 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN17P56750 AC131212.1-201ENST00000613771 668 ntBASIC19.91■□□□□ 0.78
CLDN17P56750 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN17P56750 C17orf82-201ENST00000623772 1530 ntBASIC19.91■□□□□ 0.78
CLDN17P56750 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN17P56750 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN17P56750 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLDN17P56750 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN17P56750 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN17P56750 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLDN17P56750 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN17P56750 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN17P56750 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN17P56750 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.9■□□□□ 0.78
CLDN17P56750 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN17P56750 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN17P56750 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN17P56750 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN17P56750 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN17P56750 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN17P56750 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms