Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 pRNA.11-201ENST00000618423 90 ntBASIC16.44■□□□□ 0.22
APOC4P55056 pRNA.13-201ENST00000619112 90 ntBASIC16.44■□□□□ 0.22
APOC4P55056 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
APOC4P55056 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
APOC4P55056 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
APOC4P55056 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
APOC4P55056 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
APOC4P55056 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
APOC4P55056 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.43■□□□□ 0.22
APOC4P55056 AF213884.3-201ENST00000563833 479 ntBASIC16.43■□□□□ 0.22
APOC4P55056 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
APOC4P55056 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.43■□□□□ 0.22
APOC4P55056 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
APOC4P55056 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
APOC4P55056 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
APOC4P55056 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
APOC4P55056 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.43■□□□□ 0.22
APOC4P55056 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
APOC4P55056 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.42■□□□□ 0.22
APOC4P55056 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 SUDS3P1-201ENST00000505831 966 ntBASIC16.42■□□□□ 0.22
APOC4P55056 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.42■□□□□ 0.22
APOC4P55056 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOC4P55056 AL139125.2-201ENST00000623134 1869 ntBASIC16.42■□□□□ 0.22
APOC4P55056 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOC4P55056 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOC4P55056 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
APOC4P55056 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOC4P55056 MIR939-201ENST00000401314 82 ntBASIC16.41■□□□□ 0.22
APOC4P55056 AP001330.3-201ENST00000520123 633 ntBASIC16.41■□□□□ 0.22
APOC4P55056 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.41■□□□□ 0.22
APOC4P55056 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
APOC4P55056 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
APOC4P55056 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
APOC4P55056 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOC4P55056 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APOC4P55056 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
APOC4P55056 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
APOC4P55056 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.4■□□□□ 0.22
APOC4P55056 MIR935-201ENST00000401179 91 ntBASIC16.4■□□□□ 0.22
APOC4P55056 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.4■□□□□ 0.22
APOC4P55056 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
APOC4P55056 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
APOC4P55056 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.4■□□□□ 0.22
APOC4P55056 AL031432.3-201ENST00000607698 485 ntBASIC16.4■□□□□ 0.22
APOC4P55056 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
APOC4P55056 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
APOC4P55056 AC144652.1-201ENST00000609974 1624 ntBASIC16.4■□□□□ 0.22
APOC4P55056 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.4■□□□□ 0.22
APOC4P55056 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.4■□□□□ 0.22
APOC4P55056 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
APOC4P55056 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
APOC4P55056 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APOC4P55056 RASA4CP-201ENST00000424092 1398 ntBASIC16.39■□□□□ 0.21
APOC4P55056 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
APOC4P55056 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APOC4P55056 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APOC4P55056 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
APOC4P55056 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APOC4P55056 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APOC4P55056 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APOC4P55056 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.39■□□□□ 0.21
APOC4P55056 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.39■□□□□ 0.21
APOC4P55056 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.39■□□□□ 0.21
APOC4P55056 AC008764.7-201ENST00000593779 1081 ntBASIC16.39■□□□□ 0.21
APOC4P55056 AL136967.2-201ENST00000623968 743 ntBASIC16.39■□□□□ 0.21
APOC4P55056 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
APOC4P55056 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
APOC4P55056 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
APOC4P55056 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APOC4P55056 LINC01529-204ENST00000636474 1715 ntBASIC16.39■□□□□ 0.21
APOC4P55056 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APOC4P55056 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.38■□□□□ 0.21
APOC4P55056 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APOC4P55056 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APOC4P55056 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
APOC4P55056 BX842568.3-201ENST00000418104 571 ntBASIC16.38■□□□□ 0.21
APOC4P55056 DUX4L4-201ENST00000566884 1269 ntBASIC16.38■□□□□ 0.21
APOC4P55056 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.38■□□□□ 0.21
APOC4P55056 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.38■□□□□ 0.21
APOC4P55056 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.38■□□□□ 0.21
APOC4P55056 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.38■□□□□ 0.21
APOC4P55056 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APOC4P55056 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APOC4P55056 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APOC4P55056 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APOC4P55056 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.37■□□□□ 0.21
APOC4P55056 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APOC4P55056 AC233992.3-201ENST00000607491 485 ntBASIC16.37■□□□□ 0.21
APOC4P55056 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APOC4P55056 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 804.6 ms