Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SMSP52788 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMSP52788 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMSP52788 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMSP52788 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.86■□□□□ 0.93
SMSP52788 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.86■□□□□ 0.93
SMSP52788 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.86■□□□□ 0.93
SMSP52788 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMSP52788 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMSP52788 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.86■□□□□ 0.93
SMSP52788 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMSP52788 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMSP52788 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMSP52788 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.85■□□□□ 0.93
SMSP52788 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMSP52788 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SMSP52788 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMSP52788 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.85■□□□□ 0.93
SMSP52788 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMSP52788 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SMSP52788 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SMSP52788 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SMSP52788 PBX2P1-201ENST00000493219 1291 ntBASIC20.84■□□□□ 0.93
SMSP52788 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.84■□□□□ 0.93
SMSP52788 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SMSP52788 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.84■□□□□ 0.93
SMSP52788 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SMSP52788 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMSP52788 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.83■□□□□ 0.93
SMSP52788 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMSP52788 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMSP52788 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.83■□□□□ 0.93
SMSP52788 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMSP52788 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMSP52788 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SMSP52788 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.83■□□□□ 0.93
SMSP52788 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SMSP52788 AC142381.2-201ENST00000566120 298 ntBASIC20.83■□□□□ 0.93
SMSP52788 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMSP52788 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMSP52788 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMSP52788 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMSP52788 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.83■□□□□ 0.92
SMSP52788 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMSP52788 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMSP52788 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMSP52788 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMSP52788 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMSP52788 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SMSP52788 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.82■□□□□ 0.92
SMSP52788 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.82■□□□□ 0.92
SMSP52788 AC106739.1-201ENST00000617035 715 ntBASIC20.82■□□□□ 0.92
SMSP52788 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMSP52788 AL117328.2-201ENST00000624617 1940 ntBASIC20.82■□□□□ 0.92
SMSP52788 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMSP52788 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMSP52788 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMSP52788 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMSP52788 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMSP52788 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMSP52788 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMSP52788 AF131216.4-201ENST00000638924 1588 ntBASIC20.81■□□□□ 0.92
SMSP52788 ANOS2P-203ENST00000472227 1816 ntBASIC20.81■□□□□ 0.92
SMSP52788 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.81■□□□□ 0.92
SMSP52788 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMSP52788 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.81■□□□□ 0.92
SMSP52788 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.81■□□□□ 0.92
SMSP52788 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.81■□□□□ 0.92
SMSP52788 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMSP52788 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMSP52788 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMSP52788 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMSP52788 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.8■□□□□ 0.92
SMSP52788 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SMSP52788 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMSP52788 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMSP52788 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMSP52788 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.8■□□□□ 0.92
SMSP52788 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMSP52788 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMSP52788 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMSP52788 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMSP52788 AL161729.1-201ENST00000604104 1402 ntBASIC20.79■□□□□ 0.92
SMSP52788 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMSP52788 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.79■□□□□ 0.92
SMSP52788 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SMSP52788 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMSP52788 MIR6722-201ENST00000617286 78 ntBASIC20.79■□□□□ 0.92
SMSP52788 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.79■□□□□ 0.92
SMSP52788 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms