Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GDNFP39905 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GDNFP39905 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GDNFP39905 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GDNFP39905 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GDNFP39905 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GDNFP39905 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GDNFP39905 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GDNFP39905 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GDNFP39905 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.42■□□□□ 0.7
GDNFP39905 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.42■□□□□ 0.7
GDNFP39905 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.42■□□□□ 0.7
GDNFP39905 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.42■□□□□ 0.7
GDNFP39905 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GDNFP39905 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GDNFP39905 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GDNFP39905 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDNFP39905 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDNFP39905 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.41■□□□□ 0.7
GDNFP39905 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GDNFP39905 ATP5G2P3-201ENST00000429083 425 ntBASIC19.41■□□□□ 0.7
GDNFP39905 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDNFP39905 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDNFP39905 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDNFP39905 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
GDNFP39905 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.41■□□□□ 0.7
GDNFP39905 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GDNFP39905 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDNFP39905 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.41■□□□□ 0.7
GDNFP39905 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GDNFP39905 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
GDNFP39905 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDNFP39905 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDNFP39905 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDNFP39905 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GDNFP39905 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.4■□□□□ 0.7
GDNFP39905 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDNFP39905 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDNFP39905 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GDNFP39905 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GDNFP39905 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GDNFP39905 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GDNFP39905 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.39■□□□□ 0.7
GDNFP39905 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
GDNFP39905 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
GDNFP39905 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
GDNFP39905 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GDNFP39905 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.39■□□□□ 0.69
GDNFP39905 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.39■□□□□ 0.69
GDNFP39905 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDNFP39905 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GDNFP39905 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.38■□□□□ 0.69
GDNFP39905 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GDNFP39905 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GDNFP39905 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GDNFP39905 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GDNFP39905 ESRRAP2-201ENST00000418437 1549 ntBASIC19.38■□□□□ 0.69
GDNFP39905 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GDNFP39905 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
GDNFP39905 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.38■□□□□ 0.69
GDNFP39905 SLC25A24-204ENST00000569674 2357 ntBASIC19.37■□□□□ 0.69
GDNFP39905 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDNFP39905 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.37■□□□□ 0.69
GDNFP39905 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
GDNFP39905 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GDNFP39905 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GDNFP39905 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GDNFP39905 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDNFP39905 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDNFP39905 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.37■□□□□ 0.69
GDNFP39905 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDNFP39905 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.37■□□□□ 0.69
GDNFP39905 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDNFP39905 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GDNFP39905 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GDNFP39905 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.36■□□□□ 0.69
GDNFP39905 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GDNFP39905 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.36■□□□□ 0.69
GDNFP39905 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GDNFP39905 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GDNFP39905 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.36■□□□□ 0.69
GDNFP39905 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.36■□□□□ 0.69
GDNFP39905 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.36■□□□□ 0.69
GDNFP39905 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GDNFP39905 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GDNFP39905 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GDNFP39905 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GDNFP39905 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.36■□□□□ 0.69
GDNFP39905 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
GDNFP39905 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GDNFP39905 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms