Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAP31040 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAP31040 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
SDHAP31040 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAP31040 AL353803.4-201ENST00000565882 1934 ntBASIC20.06■□□□□ 0.8
SDHAP31040 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAP31040 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAP31040 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAP31040 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.06■□□□□ 0.8
SDHAP31040 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SDHAP31040 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAP31040 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAP31040 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SDHAP31040 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAP31040 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAP31040 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAP31040 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAP31040 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAP31040 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SDHAP31040 AC021242.3-201ENST00000607598 1377 ntBASIC20.05■□□□□ 0.8
SDHAP31040 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAP31040 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDHAP31040 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDHAP31040 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SDHAP31040 BX664725.1-201ENST00000438252 379 ntBASIC20.04■□□□□ 0.8
SDHAP31040 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.04■□□□□ 0.8
SDHAP31040 MIR6722-201ENST00000617286 78 ntBASIC20.04■□□□□ 0.8
SDHAP31040 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.04■□□□□ 0.8
SDHAP31040 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.04■□□□□ 0.8
SDHAP31040 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.04■□□□□ 0.8
SDHAP31040 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHAP31040 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SDHAP31040 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.03■□□□□ 0.8
SDHAP31040 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.03■□□□□ 0.8
SDHAP31040 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.03■□□□□ 0.8
SDHAP31040 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.02■□□□□ 0.8
SDHAP31040 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAP31040 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SDHAP31040 AC144652.1-201ENST00000609974 1624 ntBASIC20.02■□□□□ 0.8
SDHAP31040 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAP31040 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.02■□□□□ 0.8
SDHAP31040 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAP31040 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAP31040 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAP31040 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.02■□□□□ 0.8
SDHAP31040 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.02■□□□□ 0.8
SDHAP31040 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.02■□□□□ 0.8
SDHAP31040 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.02■□□□□ 0.8
SDHAP31040 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAP31040 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAP31040 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAP31040 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SDHAP31040 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAP31040 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SDHAP31040 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SDHAP31040 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.02■□□□□ 0.79
SDHAP31040 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SDHAP31040 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SDHAP31040 AC005703.6-201ENST00000623265 1329 ntBASIC20.02■□□□□ 0.79
SDHAP31040 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.01■□□□□ 0.79
SDHAP31040 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.01■□□□□ 0.79
SDHAP31040 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAP31040 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAP31040 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAP31040 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAP31040 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.01■□□□□ 0.79
SDHAP31040 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDHAP31040 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SDHAP31040 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20■□□□□ 0.79
SDHAP31040 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SDHAP31040 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDHAP31040 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20■□□□□ 0.79
SDHAP31040 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20■□□□□ 0.79
SDHAP31040 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SDHAP31040 GUSBP5-202ENST00000510805 1989 ntBASIC20■□□□□ 0.79
SDHAP31040 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20■□□□□ 0.79
SDHAP31040 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.99■□□□□ 0.79
SDHAP31040 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDHAP31040 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDHAP31040 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDHAP31040 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDHAP31040 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.99■□□□□ 0.79
SDHAP31040 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.99■□□□□ 0.79
SDHAP31040 ESRRAP2-201ENST00000418437 1549 ntBASIC19.99■□□□□ 0.79
SDHAP31040 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SDHAP31040 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SDHAP31040 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.99■□□□□ 0.79
SDHAP31040 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDHAP31040 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDHAP31040 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDHAP31040 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SDHAP31040 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.98■□□□□ 0.79
SDHAP31040 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SDHAP31040 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.98■□□□□ 0.79
SDHAP31040 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SDHAP31040 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SDHAP31040 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SDHAP31040 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SDHAP31040 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.98■□□□□ 0.79
SDHAP31040 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms