Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 AL139246.5-201ENST00000606645 996 ntBASIC18.95■□□□□ 0.62
TNFRSF1AP19438 AL138724.1-201ENST00000606771 1088 ntBASIC18.95■□□□□ 0.62
TNFRSF1AP19438 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TNFRSF1AP19438 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 UNC93B3-201ENST00000308076 687 ntBASIC18.93■□□□□ 0.62
TNFRSF1AP19438 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFRSF1AP19438 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 DUX4L4-201ENST00000566884 1269 ntBASIC18.92■□□□□ 0.62
TNFRSF1AP19438 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1AP19438 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.91■□□□□ 0.62
TNFRSF1AP19438 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 AL136162.1-201ENST00000607711 1078 ntBASIC18.91■□□□□ 0.62
TNFRSF1AP19438 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TNFRSF1AP19438 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TNFRSF1AP19438 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1AP19438 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1AP19438 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFRSF1AP19438 AC011298.3-201ENST00000615796 283 ntBASIC18.9■□□□□ 0.62
TNFRSF1AP19438 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFRSF1AP19438 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TNFRSF1AP19438 AC135279.3-201ENST00000610945 1311 ntBASIC18.9■□□□□ 0.62
TNFRSF1AP19438 AC079630.1-202ENST00000618127 1840 ntBASIC18.9■□□□□ 0.62
TNFRSF1AP19438 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1AP19438 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TNFRSF1AP19438 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1AP19438 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1AP19438 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1AP19438 PBX2P1-201ENST00000493219 1291 ntBASIC18.89■□□□□ 0.61
TNFRSF1AP19438 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFRSF1AP19438 AC110285.6-201ENST00000617652 491 ntBASIC18.89■□□□□ 0.61
TNFRSF1AP19438 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1AP19438 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1AP19438 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFRSF1AP19438 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1AP19438 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TNFRSF1AP19438 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 SERBP1P1-201ENST00000396021 1160 ntBASIC18.88■□□□□ 0.61
TNFRSF1AP19438 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 pRNA.6-201ENST00000610482 90 ntBASIC18.88■□□□□ 0.61
TNFRSF1AP19438 pRNA.5-201ENST00000612139 90 ntBASIC18.88■□□□□ 0.61
TNFRSF1AP19438 AC106739.1-201ENST00000617035 715 ntBASIC18.88■□□□□ 0.61
TNFRSF1AP19438 pRNA.11-201ENST00000618423 90 ntBASIC18.88■□□□□ 0.61
TNFRSF1AP19438 pRNA.13-201ENST00000619112 90 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms