Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 AL353803.4-201ENST00000565882 1934 ntBASIC20.1■□□□□ 0.81
HIST1H1CP16403 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H1CP16403 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H1CP16403 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
HIST1H1CP16403 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.09■□□□□ 0.81
HIST1H1CP16403 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H1CP16403 YBX1P4-201ENST00000392794 808 ntBASIC20.09■□□□□ 0.81
HIST1H1CP16403 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.09■□□□□ 0.81
HIST1H1CP16403 SNX5-217ENST00000606557 1087 ntBASIC20.09■□□□□ 0.81
HIST1H1CP16403 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H1CP16403 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H1CP16403 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H1CP16403 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST1H1CP16403 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST1H1CP16403 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HIST1H1CP16403 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HIST1H1CP16403 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HIST1H1CP16403 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.08■□□□□ 0.81
HIST1H1CP16403 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.08■□□□□ 0.81
HIST1H1CP16403 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HIST1H1CP16403 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.08■□□□□ 0.81
HIST1H1CP16403 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.08■□□□□ 0.81
HIST1H1CP16403 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIST1H1CP16403 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HIST1H1CP16403 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HIST1H1CP16403 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H1CP16403 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H1CP16403 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H1CP16403 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H1CP16403 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H1CP16403 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.07■□□□□ 0.8
HIST1H1CP16403 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.07■□□□□ 0.8
HIST1H1CP16403 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H1CP16403 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.06■□□□□ 0.8
HIST1H1CP16403 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.06■□□□□ 0.8
HIST1H1CP16403 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.06■□□□□ 0.8
HIST1H1CP16403 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H1CP16403 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H1CP16403 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H1CP16403 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H1CP16403 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H1CP16403 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H1CP16403 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H1CP16403 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.05■□□□□ 0.8
HIST1H1CP16403 LINC00526-201ENST00000581067 1875 ntBASIC20.05■□□□□ 0.8
HIST1H1CP16403 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H1CP16403 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H1CP16403 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H1CP16403 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H1CP16403 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H1CP16403 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.04■□□□□ 0.8
HIST1H1CP16403 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.04■□□□□ 0.8
HIST1H1CP16403 AC137630.3-201ENST00000607245 391 ntBASIC20.04■□□□□ 0.8
HIST1H1CP16403 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.04■□□□□ 0.8
HIST1H1CP16403 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H1CP16403 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.04■□□□□ 0.8
HIST1H1CP16403 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HIST1H1CP16403 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.04■□□□□ 0.8
HIST1H1CP16403 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.04■□□□□ 0.8
HIST1H1CP16403 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H1CP16403 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.03■□□□□ 0.8
HIST1H1CP16403 LINC00565-201ENST00000562710 2331 ntBASIC20.03■□□□□ 0.8
HIST1H1CP16403 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.03■□□□□ 0.8
HIST1H1CP16403 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H1CP16403 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H1CP16403 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H1CP16403 ECEL1P1-201ENST00000373592 1742 ntBASIC20.03■□□□□ 0.8
HIST1H1CP16403 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HIST1H1CP16403 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.03■□□□□ 0.8
HIST1H1CP16403 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H1CP16403 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.03■□□□□ 0.8
HIST1H1CP16403 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.03■□□□□ 0.8
HIST1H1CP16403 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H1CP16403 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H1CP16403 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HIST1H1CP16403 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H1CP16403 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.03■□□□□ 0.8
HIST1H1CP16403 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.02■□□□□ 0.8
HIST1H1CP16403 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.02■□□□□ 0.8
HIST1H1CP16403 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST1H1CP16403 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST1H1CP16403 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms