Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PEPDP12955 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PEPDP12955 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PEPDP12955 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.63■□□□□ 0.89
PEPDP12955 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.63■□□□□ 0.89
PEPDP12955 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.63■□□□□ 0.89
PEPDP12955 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.63■□□□□ 0.89
PEPDP12955 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.63■□□□□ 0.89
PEPDP12955 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEPDP12955 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEPDP12955 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.62■□□□□ 0.89
PEPDP12955 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEPDP12955 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.62■□□□□ 0.89
PEPDP12955 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PEPDP12955 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PEPDP12955 ALDH1A3-203ENST00000557963 1670 ntBASIC20.61■□□□□ 0.89
PEPDP12955 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.61■□□□□ 0.89
PEPDP12955 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.61■□□□□ 0.89
PEPDP12955 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PEPDP12955 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.61■□□□□ 0.89
PEPDP12955 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.61■□□□□ 0.89
PEPDP12955 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PEPDP12955 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PEPDP12955 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PEPDP12955 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.61■□□□□ 0.89
PEPDP12955 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.61■□□□□ 0.89
PEPDP12955 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PEPDP12955 AC008406.3-201ENST00000620001 1374 ntBASIC20.6■□□□□ 0.89
PEPDP12955 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PEPDP12955 C9orf163-202ENST00000624034 2573 ntBASIC20.6■□□□□ 0.89
PEPDP12955 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PEPDP12955 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PEPDP12955 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.6■□□□□ 0.89
PEPDP12955 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PEPDP12955 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PEPDP12955 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PEPDP12955 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PEPDP12955 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEPDP12955 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEPDP12955 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEPDP12955 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.59■□□□□ 0.89
PEPDP12955 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.59■□□□□ 0.89
PEPDP12955 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEPDP12955 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PEPDP12955 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PEPDP12955 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEPDP12955 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.59■□□□□ 0.89
PEPDP12955 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.59■□□□□ 0.89
PEPDP12955 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEPDP12955 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
PEPDP12955 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PEPDP12955 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PEPDP12955 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.58■□□□□ 0.89
PEPDP12955 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PEPDP12955 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PEPDP12955 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.58■□□□□ 0.89
PEPDP12955 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PEPDP12955 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.58■□□□□ 0.89
PEPDP12955 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PEPDP12955 ANOS2P-203ENST00000472227 1816 ntBASIC20.58■□□□□ 0.89
PEPDP12955 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PEPDP12955 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
PEPDP12955 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.58■□□□□ 0.89
PEPDP12955 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.58■□□□□ 0.89
PEPDP12955 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.58■□□□□ 0.89
PEPDP12955 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PEPDP12955 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.58■□□□□ 0.89
PEPDP12955 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PEPDP12955 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.58■□□□□ 0.88
PEPDP12955 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PEPDP12955 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.58■□□□□ 0.88
PEPDP12955 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.57■□□□□ 0.88
PEPDP12955 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEPDP12955 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PEPDP12955 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEPDP12955 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEPDP12955 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.57■□□□□ 0.88
PEPDP12955 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
PEPDP12955 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PEPDP12955 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEPDP12955 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEPDP12955 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEPDP12955 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.56■□□□□ 0.88
PEPDP12955 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEPDP12955 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.56■□□□□ 0.88
PEPDP12955 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PEPDP12955 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PEPDP12955 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.56■□□□□ 0.88
PEPDP12955 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.56■□□□□ 0.88
PEPDP12955 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.56■□□□□ 0.88
PEPDP12955 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms