Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-43DP0DP04 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
IGHV3-43DP0DP04 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.56■□□□□ 0.56
IGHV3-43DP0DP04 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IGHV3-43DP0DP04 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
IGHV3-43DP0DP04 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IGHV3-43DP0DP04 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IGHV3-43DP0DP04 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.56■□□□□ 0.56
IGHV3-43DP0DP04 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 KRT125P-201ENST00000546827 989 ntBASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.55■□□□□ 0.56
IGHV3-43DP0DP04 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.54■□□□□ 0.56
IGHV3-43DP0DP04 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 AC239859.2-201ENST00000444165 318 ntBASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 AL451085.2-201ENST00000605085 799 ntBASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 C1orf229-201ENST00000623686 2258 ntBASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IGHV3-43DP0DP04 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IGHV3-43DP0DP04 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IGHV3-43DP0DP04 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IGHV3-43DP0DP04 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IGHV3-43DP0DP04 AC009299.2-201ENST00000482477 511 ntBASIC18.52■□□□□ 0.56
IGHV3-43DP0DP04 MIR4787-201ENST00000607364 84 ntBASIC18.52■□□□□ 0.56
IGHV3-43DP0DP04 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.52■□□□□ 0.56
IGHV3-43DP0DP04 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.52■□□□□ 0.55
IGHV3-43DP0DP04 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 AC092028.1-203ENST00000608262 953 ntBASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-43DP0DP04 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 TSPY9P-201ENST00000440215 945 ntBASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 TSPY11P-201ENST00000442607 1045 ntBASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-43DP0DP04 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms